Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CACNB3P54284 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CACNB3P54284 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC20.69■□□□□ 0.9
CACNB3P54284 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.69■□□□□ 0.9
CACNB3P54284 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CACNB3P54284 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CACNB3P54284 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CACNB3P54284 REXO1L11P-201ENST00000620964 1927 ntBASIC20.69■□□□□ 0.9
CACNB3P54284 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CACNB3P54284 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CACNB3P54284 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC20.69■□□□□ 0.9
CACNB3P54284 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC20.69■□□□□ 0.9
CACNB3P54284 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC20.69■□□□□ 0.9
CACNB3P54284 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC20.69■□□□□ 0.9
CACNB3P54284 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC20.69■□□□□ 0.9
CACNB3P54284 GGTLC5P-201ENST00000617623 998 ntBASIC20.69■□□□□ 0.9
CACNB3P54284 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.69■□□□□ 0.9
CACNB3P54284 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CACNB3P54284 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CACNB3P54284 BX323043.1-201ENST00000641006 1765 ntBASIC20.69■□□□□ 0.9
CACNB3P54284 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CACNB3P54284 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC20.68■□□□□ 0.9
CACNB3P54284 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.68■□□□□ 0.9
CACNB3P54284 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
CACNB3P54284 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CACNB3P54284 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CACNB3P54284 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC20.68■□□□□ 0.9
CACNB3P54284 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CACNB3P54284 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CACNB3P54284 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
CACNB3P54284 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CACNB3P54284 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CACNB3P54284 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CACNB3P54284 ATP6V0CP3-201ENST00000417255 467 ntBASIC20.68■□□□□ 0.9
CACNB3P54284 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC20.68■□□□□ 0.9
CACNB3P54284 AC074386.1-202ENST00000463561 864 ntBASIC20.68■□□□□ 0.9
CACNB3P54284 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC20.68■□□□□ 0.9
CACNB3P54284 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
CACNB3P54284 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC20.68■□□□□ 0.9
CACNB3P54284 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC20.68■□□□□ 0.9
CACNB3P54284 AC106028.4-201ENST00000614509 607 ntBASIC20.68■□□□□ 0.9
CACNB3P54284 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC20.68■□□□□ 0.9
CACNB3P54284 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.68■□□□□ 0.9
CACNB3P54284 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CACNB3P54284 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CACNB3P54284 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CACNB3P54284 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CACNB3P54284 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CACNB3P54284 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CACNB3P54284 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CACNB3P54284 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC20.68■□□□□ 0.9
CACNB3P54284 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.68■□□□□ 0.9
CACNB3P54284 KRT18P55-202ENST00000578578 1546 ntBASIC20.68■□□□□ 0.9
CACNB3P54284 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.67■□□□□ 0.9
CACNB3P54284 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.67■□□□□ 0.9
CACNB3P54284 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CACNB3P54284 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CACNB3P54284 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CACNB3P54284 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CACNB3P54284 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.67■□□□□ 0.9
CACNB3P54284 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
CACNB3P54284 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CACNB3P54284 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CACNB3P54284 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CACNB3P54284 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CACNB3P54284 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC20.67■□□□□ 0.9
CACNB3P54284 PON3-203ENST00000427422 894 ntTSL 3 BASIC20.67■□□□□ 0.9
CACNB3P54284 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC20.67■□□□□ 0.9
CACNB3P54284 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CACNB3P54284 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC20.67■□□□□ 0.9
CACNB3P54284 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CACNB3P54284 AP002472.1-201ENST00000577490 586 ntBASIC20.67■□□□□ 0.9
CACNB3P54284 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC20.67■□□□□ 0.9
CACNB3P54284 AC091812.2-201ENST00000619081 385 ntBASIC20.67■□□□□ 0.9
CACNB3P54284 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CACNB3P54284 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CACNB3P54284 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC20.67■□□□□ 0.9
CACNB3P54284 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CACNB3P54284 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CACNB3P54284 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CACNB3P54284 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CACNB3P54284 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
CACNB3P54284 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.66■□□□□ 0.9
CACNB3P54284 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CACNB3P54284 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CACNB3P54284 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.66■□□□□ 0.9
CACNB3P54284 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
CACNB3P54284 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CACNB3P54284 MYCLP1-201ENST00000372451 1075 ntBASIC20.66■□□□□ 0.9
CACNB3P54284 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CACNB3P54284 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC20.66■□□□□ 0.9
CACNB3P54284 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC20.66■□□□□ 0.9
CACNB3P54284 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC20.66■□□□□ 0.9
CACNB3P54284 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC20.66■□□□□ 0.9
CACNB3P54284 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC20.66■□□□□ 0.9
CACNB3P54284 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CACNB3P54284 AL135999.2-201ENST00000622438 1686 ntBASIC20.66■□□□□ 0.9
CACNB3P54284 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC20.66■□□□□ 0.9
CACNB3P54284 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CACNB3P54284 AMT-250ENST00000637682 1823 ntTSL 5 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms