Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF144AP50876 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF144AP50876 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.34■□□□□ 0.21
RNF144AP50876 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF144AP50876 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF144AP50876 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF144AP50876 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF144AP50876 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF144AP50876 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.34■□□□□ 0.21
RNF144AP50876 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.34■□□□□ 0.21
RNF144AP50876 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.34■□□□□ 0.21
RNF144AP50876 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF144AP50876 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.34■□□□□ 0.21
RNF144AP50876 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF144AP50876 BX276092.5-203ENST00000456199 560 ntBASIC16.34■□□□□ 0.21
RNF144AP50876 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.34■□□□□ 0.21
RNF144AP50876 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.34■□□□□ 0.21
RNF144AP50876 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.34■□□□□ 0.21
RNF144AP50876 GUSBP12-201ENST00000513727 720 ntBASIC16.34■□□□□ 0.21
RNF144AP50876 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.34■□□□□ 0.21
RNF144AP50876 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.34■□□□□ 0.21
RNF144AP50876 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF144AP50876 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.34■□□□□ 0.21
RNF144AP50876 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.34■□□□□ 0.21
RNF144AP50876 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF144AP50876 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF144AP50876 AC093458.2-201ENST00000623150 629 ntBASIC16.34■□□□□ 0.21
RNF144AP50876 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF144AP50876 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF144AP50876 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF144AP50876 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF144AP50876 AC016734.2-201ENST00000624325 1377 ntBASIC16.34■□□□□ 0.21
RNF144AP50876 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF144AP50876 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
RNF144AP50876 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF144AP50876 AC108860.2-201ENST00000562760 2183 ntBASIC16.34■□□□□ 0.21
RNF144AP50876 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF144AP50876 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF144AP50876 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.34■□□□□ 0.21
RNF144AP50876 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RNF144AP50876 LINC00304-203ENST00000565008 1864 ntBASIC16.33■□□□□ 0.21
RNF144AP50876 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RNF144AP50876 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RNF144AP50876 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RNF144AP50876 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.21
RNF144AP50876 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNF144AP50876 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNF144AP50876 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF144AP50876 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF144AP50876 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF144AP50876 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
RNF144AP50876 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
RNF144AP50876 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF144AP50876 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNF144AP50876 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNF144AP50876 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.33■□□□□ 0.2
RNF144AP50876 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RNF144AP50876 KRT8P26-201ENST00000534154 1276 ntBASIC16.33■□□□□ 0.2
RNF144AP50876 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF144AP50876 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
RNF144AP50876 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF144AP50876 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF144AP50876 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF144AP50876 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF144AP50876 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNF144AP50876 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF144AP50876 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF144AP50876 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNF144AP50876 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNF144AP50876 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF144AP50876 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF144AP50876 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF144AP50876 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF144AP50876 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF144AP50876 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF144AP50876 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF144AP50876 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RNF144AP50876 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
RNF144AP50876 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF144AP50876 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF144AP50876 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF144AP50876 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
RNF144AP50876 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF144AP50876 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF144AP50876 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
RNF144AP50876 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF144AP50876 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF144AP50876 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
RNF144AP50876 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF144AP50876 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF144AP50876 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF144AP50876 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
RNF144AP50876 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF144AP50876 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF144AP50876 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF144AP50876 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF144AP50876 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF144AP50876 CROCCP2-202ENST00000412962 2773 ntBASIC16.32■□□□□ 0.2
RNF144AP50876 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF144AP50876 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms