Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KRT6CP48668 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
KRT6CP48668 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT6CP48668 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT6CP48668 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
KRT6CP48668 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT6CP48668 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT6CP48668 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
KRT6CP48668 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.05■□□□□ 0.32
KRT6CP48668 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT6CP48668 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
KRT6CP48668 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.05■□□□□ 0.32
KRT6CP48668 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.05■□□□□ 0.32
KRT6CP48668 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT6CP48668 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.05■□□□□ 0.32
KRT6CP48668 AC096633.1-201ENST00000422446 749 ntBASIC17.05■□□□□ 0.32
KRT6CP48668 LINC01238-205ENST00000567549 1107 ntBASIC17.05■□□□□ 0.32
KRT6CP48668 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.05■□□□□ 0.32
KRT6CP48668 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.05■□□□□ 0.32
KRT6CP48668 Z83836.1-201ENST00000624605 1642 ntBASIC17.05■□□□□ 0.32
KRT6CP48668 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT6CP48668 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
KRT6CP48668 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT6CP48668 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT6CP48668 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT6CP48668 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.05■□□□□ 0.32
KRT6CP48668 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.05■□□□□ 0.32
KRT6CP48668 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.05■□□□□ 0.32
KRT6CP48668 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT6CP48668 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT6CP48668 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT6CP48668 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT6CP48668 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
KRT6CP48668 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT6CP48668 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT6CP48668 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.04■□□□□ 0.32
KRT6CP48668 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
KRT6CP48668 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT6CP48668 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT6CP48668 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KRT6CP48668 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT6CP48668 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT6CP48668 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT6CP48668 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.04■□□□□ 0.32
KRT6CP48668 AC063952.2-201ENST00000498792 1227 ntBASIC17.04■□□□□ 0.32
KRT6CP48668 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.04■□□□□ 0.32
KRT6CP48668 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
KRT6CP48668 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.04■□□□□ 0.32
KRT6CP48668 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.04■□□□□ 0.32
KRT6CP48668 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.04■□□□□ 0.32
KRT6CP48668 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT6CP48668 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
KRT6CP48668 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT6CP48668 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
KRT6CP48668 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.04■□□□□ 0.32
KRT6CP48668 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KRT6CP48668 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
KRT6CP48668 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
KRT6CP48668 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
KRT6CP48668 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KRT6CP48668 AC016396.2-201ENST00000562575 1417 ntBASIC17.04■□□□□ 0.32
KRT6CP48668 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT6CP48668 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KRT6CP48668 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT6CP48668 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KRT6CP48668 AP001094.4-201ENST00000579008 2176 ntBASIC17.04■□□□□ 0.32
KRT6CP48668 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT6CP48668 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.03■□□□□ 0.32
KRT6CP48668 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
KRT6CP48668 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
KRT6CP48668 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.03■□□□□ 0.32
KRT6CP48668 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT6CP48668 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT6CP48668 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.03■□□□□ 0.32
KRT6CP48668 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.03■□□□□ 0.32
KRT6CP48668 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT6CP48668 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
KRT6CP48668 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.03■□□□□ 0.32
KRT6CP48668 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.03■□□□□ 0.32
KRT6CP48668 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
KRT6CP48668 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT6CP48668 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT6CP48668 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.03■□□□□ 0.32
KRT6CP48668 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.03■□□□□ 0.32
KRT6CP48668 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.03■□□□□ 0.32
KRT6CP48668 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.03■□□□□ 0.32
KRT6CP48668 RNF126P1-202ENST00000569893 925 ntBASIC17.03■□□□□ 0.32
KRT6CP48668 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.03■□□□□ 0.32
KRT6CP48668 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.03■□□□□ 0.32
KRT6CP48668 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.03■□□□□ 0.32
KRT6CP48668 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
KRT6CP48668 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.03■□□□□ 0.32
KRT6CP48668 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT6CP48668 AC009053.2-201ENST00000563701 2365 ntBASIC17.03■□□□□ 0.32
KRT6CP48668 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT6CP48668 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT6CP48668 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT6CP48668 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
KRT6CP48668 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT6CP48668 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms