Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
MTHFRP42898 ANO7L1-203ENST00000602586 1720 ntBASIC18.32■□□□□ 0.52
MTHFRP42898 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MTHFRP42898 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MTHFRP42898 AC093010.1-201ENST00000473625 1624 ntBASIC18.32■□□□□ 0.52
MTHFRP42898 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
MTHFRP42898 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MTHFRP42898 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MTHFRP42898 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
MTHFRP42898 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MTHFRP42898 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MTHFRP42898 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.32■□□□□ 0.52
MTHFRP42898 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.32■□□□□ 0.52
MTHFRP42898 AC074386.1-202ENST00000463561 864 ntBASIC18.32■□□□□ 0.52
MTHFRP42898 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.32■□□□□ 0.52
MTHFRP42898 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.32■□□□□ 0.52
MTHFRP42898 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
MTHFRP42898 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.32■□□□□ 0.52
MTHFRP42898 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.32■□□□□ 0.52
MTHFRP42898 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
MTHFRP42898 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
MTHFRP42898 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
MTHFRP42898 AC007064.4-201ENST00000637740 555 ntBASIC18.32■□□□□ 0.52
MTHFRP42898 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MTHFRP42898 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MTHFRP42898 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MTHFRP42898 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.32■□□□□ 0.52
MTHFRP42898 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.32■□□□□ 0.52
MTHFRP42898 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.32■□□□□ 0.52
MTHFRP42898 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MTHFRP42898 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MTHFRP42898 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
MTHFRP42898 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
MTHFRP42898 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MTHFRP42898 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MTHFRP42898 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.32■□□□□ 0.52
MTHFRP42898 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.32■□□□□ 0.52
MTHFRP42898 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MTHFRP42898 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.32■□□□□ 0.52
MTHFRP42898 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MTHFRP42898 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MTHFRP42898 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MTHFRP42898 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MTHFRP42898 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
MTHFRP42898 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
MTHFRP42898 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
MTHFRP42898 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
MTHFRP42898 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MTHFRP42898 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
MTHFRP42898 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MTHFRP42898 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MTHFRP42898 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MTHFRP42898 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MTHFRP42898 AP002414.1-201ENST00000391405 1147 ntBASIC18.31■□□□□ 0.52
MTHFRP42898 AL035633.1-201ENST00000406139 838 ntBASIC18.31■□□□□ 0.52
MTHFRP42898 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.31■□□□□ 0.52
MTHFRP42898 RHOQP3-201ENST00000437982 621 ntBASIC18.31■□□□□ 0.52
MTHFRP42898 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MTHFRP42898 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.31■□□□□ 0.52
MTHFRP42898 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.31■□□□□ 0.52
MTHFRP42898 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.31■□□□□ 0.52
MTHFRP42898 AC004449.1-201ENST00000564240 433 ntBASIC18.31■□□□□ 0.52
MTHFRP42898 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
MTHFRP42898 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.31■□□□□ 0.52
MTHFRP42898 AC004835.2-201ENST00000603762 682 ntBASIC18.31■□□□□ 0.52
MTHFRP42898 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
MTHFRP42898 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
MTHFRP42898 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
MTHFRP42898 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
MTHFRP42898 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MTHFRP42898 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
MTHFRP42898 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MTHFRP42898 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.31■□□□□ 0.52
MTHFRP42898 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MTHFRP42898 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.31■□□□□ 0.52
MTHFRP42898 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.31■□□□□ 0.52
MTHFRP42898 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MTHFRP42898 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MTHFRP42898 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MTHFRP42898 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.3■□□□□ 0.52
MTHFRP42898 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MTHFRP42898 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MTHFRP42898 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MTHFRP42898 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MTHFRP42898 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MTHFRP42898 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MTHFRP42898 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MTHFRP42898 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MTHFRP42898 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.3■□□□□ 0.52
MTHFRP42898 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.3■□□□□ 0.52
MTHFRP42898 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
MTHFRP42898 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
MTHFRP42898 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
MTHFRP42898 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
MTHFRP42898 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
MTHFRP42898 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MTHFRP42898 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.3■□□□□ 0.52
MTHFRP42898 AC104581.1-202ENST00000635932 2618 ntBASIC18.3■□□□□ 0.52
MTHFRP42898 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MTHFRP42898 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms