Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CEACAM3P40198 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CEACAM3P40198 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CEACAM3P40198 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CEACAM3P40198 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.36□□□□□ -0.11
CEACAM3P40198 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CEACAM3P40198 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CEACAM3P40198 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CEACAM3P40198 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC14.35□□□□□ -0.11
CEACAM3P40198 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CEACAM3P40198 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CEACAM3P40198 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CEACAM3P40198 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CEACAM3P40198 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CEACAM3P40198 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CEACAM3P40198 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CEACAM3P40198 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14.35□□□□□ -0.11
CEACAM3P40198 NOC2LP2-201ENST00000407594 1944 ntBASIC14.35□□□□□ -0.11
CEACAM3P40198 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CEACAM3P40198 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CEACAM3P40198 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CEACAM3P40198 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC14.35□□□□□ -0.11
CEACAM3P40198 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CEACAM3P40198 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
CEACAM3P40198 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CEACAM3P40198 AC005332.8-201ENST00000622750 2735 ntBASIC14.35□□□□□ -0.11
CEACAM3P40198 MYCLP1-201ENST00000372451 1075 ntBASIC14.35□□□□□ -0.11
CEACAM3P40198 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CEACAM3P40198 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC14.35□□□□□ -0.11
CEACAM3P40198 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC14.35□□□□□ -0.11
CEACAM3P40198 THAP5-204ENST00000438865 868 ntTSL 2 BASIC14.35□□□□□ -0.11
CEACAM3P40198 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CEACAM3P40198 PON3-205ENST00000451904 1053 ntTSL 3 BASIC14.35□□□□□ -0.11
CEACAM3P40198 KRT16P4-201ENST00000453883 522 ntBASIC14.35□□□□□ -0.11
CEACAM3P40198 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CEACAM3P40198 NMU-205ENST00000511469 756 ntTSL 3 BASIC14.35□□□□□ -0.11
CEACAM3P40198 IGHV3-52-201ENST00000519770 353 ntBASIC14.35□□□□□ -0.11
CEACAM3P40198 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC14.35□□□□□ -0.11
CEACAM3P40198 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC14.35□□□□□ -0.11
CEACAM3P40198 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC14.35□□□□□ -0.11
CEACAM3P40198 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.35□□□□□ -0.11
CEACAM3P40198 AC111152.3-201ENST00000569699 673 ntBASIC14.35□□□□□ -0.11
CEACAM3P40198 PRR29-207ENST00000580752 458 ntTSL 3 BASIC14.35□□□□□ -0.11
CEACAM3P40198 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC14.35□□□□□ -0.11
CEACAM3P40198 AC114341.1-201ENST00000618070 349 ntBASIC14.35□□□□□ -0.11
CEACAM3P40198 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CEACAM3P40198 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
CEACAM3P40198 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CEACAM3P40198 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CEACAM3P40198 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CEACAM3P40198 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CEACAM3P40198 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC14.35□□□□□ -0.11
CEACAM3P40198 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC14.35□□□□□ -0.11
CEACAM3P40198 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC14.35□□□□□ -0.11
CEACAM3P40198 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC14.35□□□□□ -0.11
CEACAM3P40198 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CEACAM3P40198 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CEACAM3P40198 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CEACAM3P40198 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC14.34□□□□□ -0.11
CEACAM3P40198 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CEACAM3P40198 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CEACAM3P40198 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CEACAM3P40198 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CEACAM3P40198 PC-208ENST00000529047 1607 ntTSL 3 BASIC14.34□□□□□ -0.11
CEACAM3P40198 ADM-208ENST00000534464 1640 ntTSL 2 BASIC14.34□□□□□ -0.11
CEACAM3P40198 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
CEACAM3P40198 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC14.34□□□□□ -0.11
CEACAM3P40198 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CEACAM3P40198 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC14.34□□□□□ -0.11
CEACAM3P40198 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.34□□□□□ -0.11
CEACAM3P40198 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CEACAM3P40198 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CEACAM3P40198 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.34□□□□□ -0.11
CEACAM3P40198 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.34□□□□□ -0.11
CEACAM3P40198 AP005901.3-202ENST00000581653 237 ntBASIC14.34□□□□□ -0.11
CEACAM3P40198 AC011467.2-201ENST00000598425 242 ntBASIC14.34□□□□□ -0.11
CEACAM3P40198 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CEACAM3P40198 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CEACAM3P40198 AC007613.1-201ENST00000572811 2597 ntBASIC14.34□□□□□ -0.11
CEACAM3P40198 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC14.34□□□□□ -0.11
CEACAM3P40198 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC14.34□□□□□ -0.11
CEACAM3P40198 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CEACAM3P40198 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC14.34□□□□□ -0.11
CEACAM3P40198 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC14.34□□□□□ -0.11
CEACAM3P40198 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC14.34□□□□□ -0.11
CEACAM3P40198 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CEACAM3P40198 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CEACAM3P40198 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CEACAM3P40198 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CEACAM3P40198 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CEACAM3P40198 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CEACAM3P40198 AC006116.8-202ENST00000587620 1550 ntBASIC14.34□□□□□ -0.11
CEACAM3P40198 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.34□□□□□ -0.11
CEACAM3P40198 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CEACAM3P40198 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CEACAM3P40198 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CEACAM3P40198 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC14.34□□□□□ -0.11
CEACAM3P40198 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CEACAM3P40198 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC14.34□□□□□ -0.11
CEACAM3P40198 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms