Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SNCAP37840 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
SNCAP37840 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
SNCAP37840 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SNCAP37840 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
SNCAP37840 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SNCAP37840 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
SNCAP37840 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SNCAP37840 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
SNCAP37840 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SNCAP37840 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SNCAP37840 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SNCAP37840 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.49□□□□□ -0.09
SNCAP37840 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
SNCAP37840 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
SNCAP37840 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC14.49□□□□□ -0.09
SNCAP37840 PENK-204ENST00000518770 863 ntTSL 2 BASIC14.49□□□□□ -0.09
SNCAP37840 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC14.49□□□□□ -0.09
SNCAP37840 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC14.49□□□□□ -0.09
SNCAP37840 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC14.49□□□□□ -0.09
SNCAP37840 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC14.49□□□□□ -0.09
SNCAP37840 AP005242.2-201ENST00000580065 1175 ntBASIC14.49□□□□□ -0.09
SNCAP37840 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SNCAP37840 AC233702.5-201ENST00000584107 538 ntBASIC14.49□□□□□ -0.09
SNCAP37840 NAT14-202ENST00000587400 416 ntTSL 5 BASIC14.49□□□□□ -0.09
SNCAP37840 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC14.49□□□□□ -0.09
SNCAP37840 AC026471.5-201ENST00000615068 467 ntBASIC14.49□□□□□ -0.09
SNCAP37840 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC14.49□□□□□ -0.09
SNCAP37840 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SNCAP37840 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SNCAP37840 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SNCAP37840 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SNCAP37840 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SNCAP37840 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
SNCAP37840 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SNCAP37840 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
SNCAP37840 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SNCAP37840 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
SNCAP37840 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
SNCAP37840 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SNCAP37840 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC14.49□□□□□ -0.09
SNCAP37840 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.49□□□□□ -0.09
SNCAP37840 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SNCAP37840 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SNCAP37840 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SNCAP37840 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC14.49□□□□□ -0.09
SNCAP37840 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SNCAP37840 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SNCAP37840 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.48□□□□□ -0.09
SNCAP37840 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
SNCAP37840 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
SNCAP37840 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SNCAP37840 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
SNCAP37840 UROS-202ENST00000368778 1556 ntTSL 2 BASIC14.48□□□□□ -0.09
SNCAP37840 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC14.48□□□□□ -0.09
SNCAP37840 LINC00554-201ENST00000564841 3011 ntBASIC14.48□□□□□ -0.09
SNCAP37840 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SNCAP37840 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SNCAP37840 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
SNCAP37840 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
SNCAP37840 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SNCAP37840 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SNCAP37840 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
SNCAP37840 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
SNCAP37840 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SNCAP37840 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SNCAP37840 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC14.48□□□□□ -0.09
SNCAP37840 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SNCAP37840 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SNCAP37840 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SNCAP37840 AC113410.3-201ENST00000623366 203 ntBASIC14.48□□□□□ -0.09
SNCAP37840 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SNCAP37840 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SNCAP37840 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC14.48□□□□□ -0.09
SNCAP37840 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SNCAP37840 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.48□□□□□ -0.09
SNCAP37840 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
SNCAP37840 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
SNCAP37840 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
SNCAP37840 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SNCAP37840 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.48□□□□□ -0.09
SNCAP37840 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SNCAP37840 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SNCAP37840 AC068587.6-202ENST00000641839 5619 ntBASIC14.47□□□□□ -0.09
SNCAP37840 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.47□□□□□ -0.09
SNCAP37840 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC14.47□□□□□ -0.09
SNCAP37840 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNCAP37840 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC14.47□□□□□ -0.09
SNCAP37840 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNCAP37840 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.47□□□□□ -0.09
SNCAP37840 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNCAP37840 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNCAP37840 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNCAP37840 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.47□□□□□ -0.09
SNCAP37840 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNCAP37840 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SNCAP37840 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SNCAP37840 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
SNCAP37840 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC14.47□□□□□ -0.09
SNCAP37840 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms