Protein–RNA interactions for Protein: P29466

CASP1, Caspase-1, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP1P29466 AC109462.3-201ENST00000573934 613 ntBASIC19.62■□□□□ 0.73
CASP1P29466 AC090616.6-201ENST00000582640 721 ntBASIC19.62■□□□□ 0.73
CASP1P29466 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.62■□□□□ 0.73
CASP1P29466 AL139327.4-201ENST00000612362 153 ntBASIC19.62■□□□□ 0.73
CASP1P29466 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.62■□□□□ 0.73
CASP1P29466 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CASP1P29466 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CASP1P29466 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
CASP1P29466 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CASP1P29466 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CASP1P29466 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CASP1P29466 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CASP1P29466 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CASP1P29466 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CASP1P29466 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CASP1P29466 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CASP1P29466 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CASP1P29466 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CASP1P29466 AC060834.1-201ENST00000443027 2032 ntBASIC19.61■□□□□ 0.73
CASP1P29466 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CASP1P29466 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CASP1P29466 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
CASP1P29466 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CASP1P29466 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.61■□□□□ 0.73
CASP1P29466 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CASP1P29466 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.61■□□□□ 0.73
CASP1P29466 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CASP1P29466 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.61■□□□□ 0.73
CASP1P29466 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.61■□□□□ 0.73
CASP1P29466 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CASP1P29466 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.61■□□□□ 0.73
CASP1P29466 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CASP1P29466 BX276092.5-203ENST00000456199 560 ntBASIC19.61■□□□□ 0.73
CASP1P29466 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
CASP1P29466 AC011840.4-201ENST00000578471 627 ntBASIC19.61■□□□□ 0.73
CASP1P29466 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.61■□□□□ 0.73
CASP1P29466 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.61■□□□□ 0.73
CASP1P29466 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CASP1P29466 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CASP1P29466 AC011676.5-201ENST00000624864 2660 ntBASIC19.61■□□□□ 0.73
CASP1P29466 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.61■□□□□ 0.73
CASP1P29466 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CASP1P29466 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CASP1P29466 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.61■□□□□ 0.73
CASP1P29466 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CASP1P29466 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CASP1P29466 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.6■□□□□ 0.73
CASP1P29466 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CASP1P29466 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CASP1P29466 NKILA-202ENST00000614771 2598 ntBASIC19.6■□□□□ 0.73
CASP1P29466 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CASP1P29466 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CASP1P29466 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CASP1P29466 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CASP1P29466 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CASP1P29466 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.6■□□□□ 0.73
CASP1P29466 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CASP1P29466 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CASP1P29466 CHCHD2P8-201ENST00000429873 447 ntBASIC19.6■□□□□ 0.73
CASP1P29466 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CASP1P29466 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CASP1P29466 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.6■□□□□ 0.73
CASP1P29466 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.6■□□□□ 0.73
CASP1P29466 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.6■□□□□ 0.73
CASP1P29466 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.6■□□□□ 0.73
CASP1P29466 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.6■□□□□ 0.73
CASP1P29466 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.6■□□□□ 0.73
CASP1P29466 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.6■□□□□ 0.73
CASP1P29466 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CASP1P29466 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CASP1P29466 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC19.6■□□□□ 0.73
CASP1P29466 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CASP1P29466 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.6■□□□□ 0.73
CASP1P29466 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CASP1P29466 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CASP1P29466 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CASP1P29466 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.6■□□□□ 0.73
CASP1P29466 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.6■□□□□ 0.73
CASP1P29466 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
CASP1P29466 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.6■□□□□ 0.73
CASP1P29466 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CASP1P29466 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CASP1P29466 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CASP1P29466 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CASP1P29466 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CASP1P29466 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CASP1P29466 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CASP1P29466 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.59■□□□□ 0.73
CASP1P29466 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CASP1P29466 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.59■□□□□ 0.73
CASP1P29466 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CASP1P29466 SLC25A1P3-201ENST00000395415 828 ntBASIC19.59■□□□□ 0.73
CASP1P29466 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.59■□□□□ 0.73
CASP1P29466 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.59■□□□□ 0.73
CASP1P29466 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.59■□□□□ 0.73
CASP1P29466 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CASP1P29466 AL121672.3-201ENST00000608644 468 ntBASIC19.59■□□□□ 0.73
CASP1P29466 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CASP1P29466 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CASP1P29466 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms