Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CTGFP29279 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTGFP29279 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
CTGFP29279 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTGFP29279 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CTGFP29279 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.61■□□□□ 0.73
CTGFP29279 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CTGFP29279 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTGFP29279 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.6■□□□□ 0.73
CTGFP29279 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.6■□□□□ 0.73
CTGFP29279 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CTGFP29279 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CTGFP29279 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CTGFP29279 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTGFP29279 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.6■□□□□ 0.73
CTGFP29279 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CTGFP29279 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTGFP29279 OR8S1-201ENST00000310194 1080 ntBASIC19.6■□□□□ 0.73
CTGFP29279 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC19.6■□□□□ 0.73
CTGFP29279 MYCLP1-201ENST00000372451 1075 ntBASIC19.6■□□□□ 0.73
CTGFP29279 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTGFP29279 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTGFP29279 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC19.6■□□□□ 0.73
CTGFP29279 HLA-V-201ENST00000429037 534 ntBASIC19.6■□□□□ 0.73
CTGFP29279 PPP6R2P1-201ENST00000450880 1275 ntBASIC19.6■□□□□ 0.73
CTGFP29279 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC19.6■□□□□ 0.73
CTGFP29279 SERBP1P5-201ENST00000510079 1181 ntBASIC19.6■□□□□ 0.73
CTGFP29279 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC19.6■□□□□ 0.73
CTGFP29279 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC19.6■□□□□ 0.73
CTGFP29279 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC19.6■□□□□ 0.73
CTGFP29279 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC19.6■□□□□ 0.73
CTGFP29279 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC19.6■□□□□ 0.73
CTGFP29279 AL645728.2-201ENST00000641974 660 ntBASIC19.6■□□□□ 0.73
CTGFP29279 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.6■□□□□ 0.73
CTGFP29279 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.6■□□□□ 0.73
CTGFP29279 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.6■□□□□ 0.73
CTGFP29279 GNAS-203ENST00000306120 1878 ntBASIC19.6■□□□□ 0.73
CTGFP29279 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CTGFP29279 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTGFP29279 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTGFP29279 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CTGFP29279 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
CTGFP29279 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CTGFP29279 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CTGFP29279 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CTGFP29279 AKAP8P1-201ENST00000434743 1349 ntBASIC19.59■□□□□ 0.73
CTGFP29279 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC19.59■□□□□ 0.73
CTGFP29279 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.59■□□□□ 0.73
CTGFP29279 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTGFP29279 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTGFP29279 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTGFP29279 MRPS18AP1-201ENST00000414458 589 ntBASIC19.59■□□□□ 0.73
CTGFP29279 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC19.59■□□□□ 0.73
CTGFP29279 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.59■□□□□ 0.73
CTGFP29279 AL158211.3-201ENST00000607385 239 ntBASIC19.59■□□□□ 0.73
CTGFP29279 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTGFP29279 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.59■□□□□ 0.73
CTGFP29279 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.59■□□□□ 0.73
CTGFP29279 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.59■□□□□ 0.73
CTGFP29279 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.59■□□□□ 0.73
CTGFP29279 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.59■□□□□ 0.73
CTGFP29279 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CTGFP29279 TDG-209ENST00000544861 1387 ntTSL 2 BASIC19.58■□□□□ 0.73
CTGFP29279 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CTGFP29279 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CTGFP29279 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.73
CTGFP29279 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.73
CTGFP29279 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.58■□□□□ 0.73
CTGFP29279 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CTGFP29279 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CTGFP29279 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.58■□□□□ 0.72
CTGFP29279 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.58■□□□□ 0.72
CTGFP29279 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CTGFP29279 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CTGFP29279 NOP2-220ENST00000545915 630 ntTSL 2 BASIC19.58■□□□□ 0.72
CTGFP29279 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CTGFP29279 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC19.58■□□□□ 0.72
CTGFP29279 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC19.58■□□□□ 0.72
CTGFP29279 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC19.58■□□□□ 0.72
CTGFP29279 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.58■□□□□ 0.72
CTGFP29279 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC19.58■□□□□ 0.72
CTGFP29279 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.58■□□□□ 0.72
CTGFP29279 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.58■□□□□ 0.72
CTGFP29279 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CTGFP29279 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CTGFP29279 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.58■□□□□ 0.72
CTGFP29279 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CTGFP29279 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CTGFP29279 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTGFP29279 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CTGFP29279 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTGFP29279 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CTGFP29279 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CTGFP29279 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTGFP29279 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.57■□□□□ 0.72
CTGFP29279 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTGFP29279 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTGFP29279 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTGFP29279 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTGFP29279 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms