Protein–RNA interactions for Protein: P26842

CD27, CD27 antigen, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD27P26842 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CD27P26842 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD27P26842 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CD27P26842 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CD27P26842 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.12■□□□□ 0.33
CD27P26842 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.12■□□□□ 0.33
CD27P26842 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CD27P26842 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
CD27P26842 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD27P26842 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD27P26842 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
CD27P26842 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.12■□□□□ 0.33
CD27P26842 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD27P26842 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CD27P26842 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CD27P26842 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CD27P26842 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD27P26842 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD27P26842 AC090164.3-201ENST00000610780 2143 ntBASIC17.11■□□□□ 0.33
CD27P26842 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD27P26842 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CD27P26842 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CD27P26842 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CD27P26842 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
CD27P26842 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD27P26842 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD27P26842 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD27P26842 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.11■□□□□ 0.33
CD27P26842 FAM185BP-201ENST00000443595 716 ntBASIC17.11■□□□□ 0.33
CD27P26842 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.11■□□□□ 0.33
CD27P26842 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD27P26842 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.11■□□□□ 0.33
CD27P26842 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CD27P26842 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.11■□□□□ 0.33
CD27P26842 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CD27P26842 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CD27P26842 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CD27P26842 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CD27P26842 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.11■□□□□ 0.33
CD27P26842 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.11■□□□□ 0.33
CD27P26842 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD27P26842 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.11■□□□□ 0.33
CD27P26842 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD27P26842 TNXA-203ENST00000507684 2038 ntBASIC17.11■□□□□ 0.33
CD27P26842 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.11■□□□□ 0.33
CD27P26842 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.11■□□□□ 0.33
CD27P26842 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD27P26842 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD27P26842 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CD27P26842 AL135999.2-201ENST00000622438 1686 ntBASIC17.1■□□□□ 0.33
CD27P26842 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CD27P26842 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
CD27P26842 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD27P26842 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.1■□□□□ 0.33
CD27P26842 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.1■□□□□ 0.33
CD27P26842 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD27P26842 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD27P26842 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD27P26842 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD27P26842 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.1■□□□□ 0.33
CD27P26842 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
CD27P26842 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.1■□□□□ 0.33
CD27P26842 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.1■□□□□ 0.33
CD27P26842 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.1■□□□□ 0.33
CD27P26842 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.1■□□□□ 0.33
CD27P26842 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.1■□□□□ 0.33
CD27P26842 AC068137.2-201ENST00000605408 478 ntBASIC17.1■□□□□ 0.33
CD27P26842 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.1■□□□□ 0.33
CD27P26842 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.1■□□□□ 0.33
CD27P26842 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.1■□□□□ 0.33
CD27P26842 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.1■□□□□ 0.33
CD27P26842 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.1■□□□□ 0.33
CD27P26842 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD27P26842 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD27P26842 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD27P26842 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CD27P26842 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD27P26842 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CD27P26842 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CD27P26842 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD27P26842 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD27P26842 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CD27P26842 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CD27P26842 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.1■□□□□ 0.33
CD27P26842 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CD27P26842 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CD27P26842 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.09■□□□□ 0.33
CD27P26842 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD27P26842 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.09■□□□□ 0.33
CD27P26842 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CD27P26842 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CD27P26842 AC098818.2-201ENST00000564925 2320 ntBASIC17.09■□□□□ 0.33
CD27P26842 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD27P26842 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD27P26842 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CD27P26842 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD27P26842 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD27P26842 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD27P26842 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD27P26842 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms