Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PTPN3P26045 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTPN3P26045 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTPN3P26045 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTPN3P26045 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTPN3P26045 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PTPN3P26045 IGHV3-47-201ENST00000425060 335 ntBASIC17.91■□□□□ 0.46
PTPN3P26045 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.91■□□□□ 0.46
PTPN3P26045 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.91■□□□□ 0.46
PTPN3P26045 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PTPN3P26045 AC011467.2-201ENST00000598425 242 ntBASIC17.91■□□□□ 0.46
PTPN3P26045 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.91■□□□□ 0.46
PTPN3P26045 NSUN5P1-202ENST00000421140 1535 ntBASIC17.91■□□□□ 0.46
PTPN3P26045 NSUN5P2-203ENST00000457352 1529 ntBASIC17.91■□□□□ 0.46
PTPN3P26045 AC106820.2-201ENST00000563775 3264 ntBASIC17.91■□□□□ 0.46
PTPN3P26045 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.91■□□□□ 0.46
PTPN3P26045 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTPN3P26045 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PTPN3P26045 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTPN3P26045 OR6D1P-202ENST00000641007 5290 ntBASIC17.91■□□□□ 0.46
PTPN3P26045 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTPN3P26045 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTPN3P26045 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTPN3P26045 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTPN3P26045 TP73-AS1-210ENST00000637775 1455 ntBASIC17.9■□□□□ 0.46
PTPN3P26045 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTPN3P26045 AC020916.1-201ENST00000587762 1774 ntBASIC17.9■□□□□ 0.46
PTPN3P26045 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PTPN3P26045 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PTPN3P26045 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.9■□□□□ 0.46
PTPN3P26045 AC103564.2-201ENST00000432853 1299 ntBASIC17.9■□□□□ 0.46
PTPN3P26045 ATP5G2P1-201ENST00000433580 426 ntBASIC17.9■□□□□ 0.46
PTPN3P26045 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PTPN3P26045 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.9■□□□□ 0.46
PTPN3P26045 IGHV3-52-201ENST00000519770 353 ntBASIC17.9■□□□□ 0.46
PTPN3P26045 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.9■□□□□ 0.46
PTPN3P26045 BNIP3P18-201ENST00000593976 575 ntBASIC17.9■□□□□ 0.46
PTPN3P26045 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.9■□□□□ 0.46
PTPN3P26045 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTPN3P26045 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
PTPN3P26045 KRT8P10-201ENST00000450021 1447 ntBASIC17.89■□□□□ 0.46
PTPN3P26045 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.89■□□□□ 0.46
PTPN3P26045 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
PTPN3P26045 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.89■□□□□ 0.46
PTPN3P26045 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.46
PTPN3P26045 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
PTPN3P26045 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTPN3P26045 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.89■□□□□ 0.45
PTPN3P26045 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.89■□□□□ 0.45
PTPN3P26045 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.89■□□□□ 0.45
PTPN3P26045 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
PTPN3P26045 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PTPN3P26045 MYCLP1-201ENST00000372451 1075 ntBASIC17.89■□□□□ 0.45
PTPN3P26045 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PTPN3P26045 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.89■□□□□ 0.45
PTPN3P26045 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
PTPN3P26045 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
PTPN3P26045 AC092119.3-201ENST00000612618 583 ntBASIC17.89■□□□□ 0.45
PTPN3P26045 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.89■□□□□ 0.45
PTPN3P26045 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTPN3P26045 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTPN3P26045 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTPN3P26045 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTPN3P26045 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTPN3P26045 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTPN3P26045 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTPN3P26045 AC016396.2-201ENST00000562575 1417 ntBASIC17.89■□□□□ 0.45
PTPN3P26045 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTPN3P26045 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN3P26045 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
PTPN3P26045 AC012313.1-201ENST00000593393 3059 ntBASIC17.88■□□□□ 0.45
PTPN3P26045 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN3P26045 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN3P26045 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN3P26045 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.88■□□□□ 0.45
PTPN3P26045 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.88■□□□□ 0.45
PTPN3P26045 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN3P26045 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.88■□□□□ 0.45
PTPN3P26045 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
PTPN3P26045 MINOS1P3-201ENST00000457048 203 ntBASIC17.88■□□□□ 0.45
PTPN3P26045 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.88■□□□□ 0.45
PTPN3P26045 AP000867.3-201ENST00000524675 377 ntBASIC17.88■□□□□ 0.45
PTPN3P26045 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.88■□□□□ 0.45
PTPN3P26045 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.88■□□□□ 0.45
PTPN3P26045 AC074051.2-201ENST00000565115 352 ntBASIC17.88■□□□□ 0.45
PTPN3P26045 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.88■□□□□ 0.45
PTPN3P26045 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.88■□□□□ 0.45
PTPN3P26045 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN3P26045 AP001094.4-201ENST00000579008 2176 ntBASIC17.88■□□□□ 0.45
PTPN3P26045 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN3P26045 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN3P26045 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
PTPN3P26045 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN3P26045 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
PTPN3P26045 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN3P26045 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN3P26045 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.88■□□□□ 0.45
PTPN3P26045 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN3P26045 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTPN3P26045 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms