Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
KCNA3P22001 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21.34■■□□□ 1.01
KCNA3P22001 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.34■■□□□ 1.01
KCNA3P22001 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
KCNA3P22001 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
KCNA3P22001 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
KCNA3P22001 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
KCNA3P22001 FLYWCH1P1-201ENST00000460917 1874 ntBASIC21.33■■□□□ 1.01
KCNA3P22001 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
KCNA3P22001 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
KCNA3P22001 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC21.33■■□□□ 1.01
KCNA3P22001 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
KCNA3P22001 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
KCNA3P22001 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC21.33■■□□□ 1.01
KCNA3P22001 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC21.33■■□□□ 1.01
KCNA3P22001 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC21.33■■□□□ 1.01
KCNA3P22001 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC21.33■■□□□ 1.01
KCNA3P22001 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.33■■□□□ 1
KCNA3P22001 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC21.33■■□□□ 1
KCNA3P22001 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.33■■□□□ 1
KCNA3P22001 TDG-209ENST00000544861 1387 ntTSL 2 BASIC21.33■■□□□ 1
KCNA3P22001 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC21.33■■□□□ 1
KCNA3P22001 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
KCNA3P22001 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
KCNA3P22001 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
KCNA3P22001 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
KCNA3P22001 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
KCNA3P22001 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
KCNA3P22001 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC21.32■■□□□ 1
KCNA3P22001 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
KCNA3P22001 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC21.32■■□□□ 1
KCNA3P22001 AL512638.1-201ENST00000457493 794 ntBASIC21.32■■□□□ 1
KCNA3P22001 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC21.32■■□□□ 1
KCNA3P22001 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC21.32■■□□□ 1
KCNA3P22001 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC21.32■■□□□ 1
KCNA3P22001 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC21.32■■□□□ 1
KCNA3P22001 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.32■■□□□ 1
KCNA3P22001 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC21.32■■□□□ 1
KCNA3P22001 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
KCNA3P22001 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC21.32■■□□□ 1
KCNA3P22001 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC21.31■■□□□ 1
KCNA3P22001 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
KCNA3P22001 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.31■■□□□ 1
KCNA3P22001 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
KCNA3P22001 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
KCNA3P22001 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
KCNA3P22001 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
KCNA3P22001 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
KCNA3P22001 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC21.31■■□□□ 1
KCNA3P22001 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
KCNA3P22001 NAA50-208ENST00000497255 789 ntTSL 5 BASIC21.31■■□□□ 1
KCNA3P22001 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC21.31■■□□□ 1
KCNA3P22001 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC21.31■■□□□ 1
KCNA3P22001 AC107918.2-201ENST00000530817 355 ntBASIC21.31■■□□□ 1
KCNA3P22001 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC21.31■■□□□ 1
KCNA3P22001 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
KCNA3P22001 CD7-202ENST00000578509 925 ntTSL 3 BASIC21.31■■□□□ 1
KCNA3P22001 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC21.31■■□□□ 1
KCNA3P22001 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
KCNA3P22001 SERF2-217ENST00000630046 862 ntTSL 5 BASIC21.31■■□□□ 1
KCNA3P22001 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.31■■□□□ 1
KCNA3P22001 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.31■■□□□ 1
KCNA3P22001 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.31■■□□□ 1
KCNA3P22001 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
KCNA3P22001 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.31■■□□□ 1
KCNA3P22001 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC21.31■■□□□ 1
KCNA3P22001 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
KCNA3P22001 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC21.3■■□□□ 1
KCNA3P22001 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC21.3■■□□□ 1
KCNA3P22001 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
KCNA3P22001 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
KCNA3P22001 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC21.3■■□□□ 1
KCNA3P22001 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC21.3■■□□□ 1
KCNA3P22001 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC21.3■■□□□ 1
KCNA3P22001 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
KCNA3P22001 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC21.3■■□□□ 1
KCNA3P22001 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC21.3■■□□□ 1
KCNA3P22001 AC069120.2-201ENST00000524091 540 ntBASIC21.3■■□□□ 1
KCNA3P22001 GATD1-206ENST00000526325 756 ntTSL 5 BASIC21.3■■□□□ 1
KCNA3P22001 SSH2-211ENST00000590153 570 ntTSL 4 BASIC21.3■■□□□ 1
KCNA3P22001 AC027307.3-201ENST00000594262 1100 ntBASIC21.3■■□□□ 1
KCNA3P22001 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
KCNA3P22001 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC21.3■■□□□ 1
KCNA3P22001 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
KCNA3P22001 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
KCNA3P22001 GNAS-203ENST00000306120 1878 ntBASIC21.3■■□□□ 1
KCNA3P22001 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC21.3■■□□□ 1
KCNA3P22001 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC21.3■■□□□ 1
KCNA3P22001 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC21.29■■□□□ 1
KCNA3P22001 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
KCNA3P22001 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC21.29■■□□□ 1
KCNA3P22001 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
KCNA3P22001 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.29■■□□□ 1
KCNA3P22001 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC21.29■■□□□ 1
KCNA3P22001 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
KCNA3P22001 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
KCNA3P22001 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
KCNA3P22001 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
KCNA3P22001 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC21.29■■□□□ 1
KCNA3P22001 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms