Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
XRCC1P18887 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
XRCC1P18887 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.53■□□□□ 0.4
XRCC1P18887 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
XRCC1P18887 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
XRCC1P18887 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.53■□□□□ 0.4
XRCC1P18887 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
XRCC1P18887 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
XRCC1P18887 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
XRCC1P18887 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
XRCC1P18887 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
XRCC1P18887 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
XRCC1P18887 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
XRCC1P18887 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
XRCC1P18887 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
XRCC1P18887 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
XRCC1P18887 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
XRCC1P18887 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
XRCC1P18887 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.53■□□□□ 0.4
XRCC1P18887 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
XRCC1P18887 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.53■□□□□ 0.4
XRCC1P18887 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
XRCC1P18887 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
XRCC1P18887 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
XRCC1P18887 KRT16P4-201ENST00000453883 522 ntBASIC17.53■□□□□ 0.4
XRCC1P18887 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.53■□□□□ 0.4
XRCC1P18887 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.53■□□□□ 0.4
XRCC1P18887 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
XRCC1P18887 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.53■□□□□ 0.4
XRCC1P18887 UNC93B7-201ENST00000509439 705 ntBASIC17.53■□□□□ 0.4
XRCC1P18887 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
XRCC1P18887 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.53■□□□□ 0.4
XRCC1P18887 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.53■□□□□ 0.4
XRCC1P18887 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.53■□□□□ 0.4
XRCC1P18887 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
XRCC1P18887 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
XRCC1P18887 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.53■□□□□ 0.4
XRCC1P18887 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
XRCC1P18887 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
XRCC1P18887 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.53■□□□□ 0.4
XRCC1P18887 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
XRCC1P18887 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
XRCC1P18887 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.53■□□□□ 0.4
XRCC1P18887 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
XRCC1P18887 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.53■□□□□ 0.4
XRCC1P18887 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.52■□□□□ 0.4
XRCC1P18887 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.52■□□□□ 0.4
XRCC1P18887 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
XRCC1P18887 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
XRCC1P18887 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
XRCC1P18887 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
XRCC1P18887 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
XRCC1P18887 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
XRCC1P18887 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.52■□□□□ 0.4
XRCC1P18887 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.52■□□□□ 0.4
XRCC1P18887 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
XRCC1P18887 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
XRCC1P18887 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
XRCC1P18887 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.52■□□□□ 0.4
XRCC1P18887 LINC01711-201ENST00000598340 967 ntBASIC17.52■□□□□ 0.4
XRCC1P18887 AL121894.2-201ENST00000602977 491 ntBASIC17.52■□□□□ 0.4
XRCC1P18887 AC138894.3-201ENST00000603787 634 ntBASIC17.52■□□□□ 0.4
XRCC1P18887 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.52■□□□□ 0.4
XRCC1P18887 AL732292.2-201ENST00000609649 430 ntBASIC17.52■□□□□ 0.4
XRCC1P18887 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.52■□□□□ 0.4
XRCC1P18887 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
XRCC1P18887 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
XRCC1P18887 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
XRCC1P18887 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
XRCC1P18887 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
XRCC1P18887 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
XRCC1P18887 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
XRCC1P18887 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
XRCC1P18887 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
XRCC1P18887 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
XRCC1P18887 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
XRCC1P18887 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
XRCC1P18887 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
XRCC1P18887 AP001094.4-201ENST00000579008 2176 ntBASIC17.52■□□□□ 0.39
XRCC1P18887 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
XRCC1P18887 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
XRCC1P18887 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.52■□□□□ 0.39
XRCC1P18887 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.51■□□□□ 0.39
XRCC1P18887 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.51■□□□□ 0.39
XRCC1P18887 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
XRCC1P18887 PHGDH-209ENST00000641074 1780 ntBASIC17.51■□□□□ 0.39
XRCC1P18887 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
XRCC1P18887 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
XRCC1P18887 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
XRCC1P18887 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
XRCC1P18887 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
XRCC1P18887 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
XRCC1P18887 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
XRCC1P18887 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.51■□□□□ 0.39
XRCC1P18887 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
XRCC1P18887 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
XRCC1P18887 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
XRCC1P18887 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.51■□□□□ 0.39
XRCC1P18887 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.51■□□□□ 0.39
XRCC1P18887 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms