Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 AL845331.1-201ENST00000424978 1190 ntBASIC17.39■□□□□ 0.37
NELFEP18615 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.39■□□□□ 0.37
NELFEP18615 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.39■□□□□ 0.37
NELFEP18615 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NELFEP18615 AP005901.3-202ENST00000581653 237 ntBASIC17.39■□□□□ 0.37
NELFEP18615 AC138894.3-201ENST00000603787 634 ntBASIC17.39■□□□□ 0.37
NELFEP18615 AL353801.3-201ENST00000609898 542 ntBASIC17.39■□□□□ 0.37
NELFEP18615 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.39■□□□□ 0.37
NELFEP18615 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
NELFEP18615 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
NELFEP18615 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NELFEP18615 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
NELFEP18615 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.39■□□□□ 0.37
NELFEP18615 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NELFEP18615 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
NELFEP18615 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NELFEP18615 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NELFEP18615 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NELFEP18615 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.38■□□□□ 0.37
NELFEP18615 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.38■□□□□ 0.37
NELFEP18615 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NELFEP18615 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NELFEP18615 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
NELFEP18615 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NELFEP18615 NSUN5P1-202ENST00000421140 1535 ntBASIC17.38■□□□□ 0.37
NELFEP18615 NSUN5P2-203ENST00000457352 1529 ntBASIC17.38■□□□□ 0.37
NELFEP18615 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NELFEP18615 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NELFEP18615 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NELFEP18615 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
NELFEP18615 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NELFEP18615 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NELFEP18615 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NELFEP18615 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NELFEP18615 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
NELFEP18615 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NELFEP18615 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
NELFEP18615 TSPY12P-201ENST00000421279 868 ntBASIC17.38■□□□□ 0.37
NELFEP18615 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NELFEP18615 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.38■□□□□ 0.37
NELFEP18615 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.38■□□□□ 0.37
NELFEP18615 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.38■□□□□ 0.37
NELFEP18615 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NELFEP18615 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
NELFEP18615 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NELFEP18615 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NELFEP18615 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NELFEP18615 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NELFEP18615 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.38■□□□□ 0.37
NELFEP18615 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NELFEP18615 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.38■□□□□ 0.37
NELFEP18615 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.38■□□□□ 0.37
NELFEP18615 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.38■□□□□ 0.37
NELFEP18615 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NELFEP18615 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
NELFEP18615 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.38■□□□□ 0.37
NELFEP18615 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NELFEP18615 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
NELFEP18615 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NELFEP18615 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NELFEP18615 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NELFEP18615 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
NELFEP18615 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NELFEP18615 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NELFEP18615 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NELFEP18615 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NELFEP18615 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NELFEP18615 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
NELFEP18615 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NELFEP18615 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NELFEP18615 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.37■□□□□ 0.37
NELFEP18615 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
NELFEP18615 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.37■□□□□ 0.37
NELFEP18615 AC091607.1-201ENST00000490318 1060 ntBASIC17.37■□□□□ 0.37
NELFEP18615 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.37■□□□□ 0.37
NELFEP18615 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.37■□□□□ 0.37
NELFEP18615 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NELFEP18615 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.37■□□□□ 0.37
NELFEP18615 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NELFEP18615 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NELFEP18615 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NELFEP18615 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
NELFEP18615 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NELFEP18615 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NELFEP18615 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NELFEP18615 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
NELFEP18615 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
NELFEP18615 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NELFEP18615 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.37■□□□□ 0.37
NELFEP18615 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NELFEP18615 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NELFEP18615 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
NELFEP18615 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.36■□□□□ 0.37
NELFEP18615 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
NELFEP18615 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NELFEP18615 AC011676.5-201ENST00000624864 2660 ntBASIC17.36■□□□□ 0.37
NELFEP18615 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
NELFEP18615 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NELFEP18615 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NELFEP18615 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms