Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.14■□□□□ 0.33
CDH1P12830 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.14■□□□□ 0.33
CDH1P12830 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.14■□□□□ 0.33
CDH1P12830 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.14■□□□□ 0.33
CDH1P12830 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
CDH1P12830 MIR3180-1-201ENST00000580374 94 ntBASIC17.14■□□□□ 0.33
CDH1P12830 MIR3180-3-201ENST00000584616 94 ntBASIC17.14■□□□□ 0.33
CDH1P12830 AC005336.2-201ENST00000593183 939 ntBASIC17.14■□□□□ 0.33
CDH1P12830 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.14■□□□□ 0.33
CDH1P12830 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CDH1P12830 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDH1P12830 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDH1P12830 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH1P12830 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH1P12830 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CDH1P12830 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH1P12830 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH1P12830 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH1P12830 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH1P12830 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH1P12830 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH1P12830 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH1P12830 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CDH1P12830 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH1P12830 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
CDH1P12830 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
CDH1P12830 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.13■□□□□ 0.33
CDH1P12830 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.13■□□□□ 0.33
CDH1P12830 DRAXINP1-201ENST00000437611 948 ntBASIC17.13■□□□□ 0.33
CDH1P12830 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH1P12830 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.13■□□□□ 0.33
CDH1P12830 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.13■□□□□ 0.33
CDH1P12830 AP005901.3-202ENST00000581653 237 ntBASIC17.13■□□□□ 0.33
CDH1P12830 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.13■□□□□ 0.33
CDH1P12830 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.13■□□□□ 0.33
CDH1P12830 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.13■□□□□ 0.33
CDH1P12830 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH1P12830 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.13■□□□□ 0.33
CDH1P12830 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH1P12830 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.13■□□□□ 0.33
CDH1P12830 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.13■□□□□ 0.33
CDH1P12830 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH1P12830 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.13■□□□□ 0.33
CDH1P12830 AC233702.3-201ENST00000578656 1387 ntBASIC17.13■□□□□ 0.33
CDH1P12830 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH1P12830 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH1P12830 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.12■□□□□ 0.33
CDH1P12830 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH1P12830 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.12■□□□□ 0.33
CDH1P12830 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.12■□□□□ 0.33
CDH1P12830 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH1P12830 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH1P12830 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.12■□□□□ 0.33
CDH1P12830 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.12■□□□□ 0.33
CDH1P12830 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH1P12830 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.12■□□□□ 0.33
CDH1P12830 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH1P12830 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH1P12830 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH1P12830 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH1P12830 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH1P12830 AC246785.2-201ENST00000432512 513 ntBASIC17.12■□□□□ 0.33
CDH1P12830 ATP5G2P1-201ENST00000433580 426 ntBASIC17.12■□□□□ 0.33
CDH1P12830 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.12■□□□□ 0.33
CDH1P12830 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH1P12830 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.12■□□□□ 0.33
CDH1P12830 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH1P12830 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.12■□□□□ 0.33
CDH1P12830 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.12■□□□□ 0.33
CDH1P12830 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.12■□□□□ 0.33
CDH1P12830 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.12■□□□□ 0.33
CDH1P12830 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.12■□□□□ 0.33
CDH1P12830 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CDH1P12830 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
CDH1P12830 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH1P12830 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH1P12830 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH1P12830 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH1P12830 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH1P12830 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH1P12830 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH1P12830 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH1P12830 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH1P12830 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH1P12830 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH1P12830 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH1P12830 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.12■□□□□ 0.33
CDH1P12830 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.12■□□□□ 0.33
CDH1P12830 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH1P12830 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH1P12830 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH1P12830 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH1P12830 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.11■□□□□ 0.33
CDH1P12830 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.11■□□□□ 0.33
CDH1P12830 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CDH1P12830 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDH1P12830 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH1P12830 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.11■□□□□ 0.33
CDH1P12830 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.11■□□□□ 0.33
CDH1P12830 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms