Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.32■□□□□ 0.36
CAPN1P07384 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.32■□□□□ 0.36
CAPN1P07384 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.32■□□□□ 0.36
CAPN1P07384 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.32■□□□□ 0.36
CAPN1P07384 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.32■□□□□ 0.36
CAPN1P07384 GPR32P1-201ENST00000601788 811 ntBASIC17.32■□□□□ 0.36
CAPN1P07384 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CAPN1P07384 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CAPN1P07384 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CAPN1P07384 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CAPN1P07384 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CAPN1P07384 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CAPN1P07384 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.32■□□□□ 0.36
CAPN1P07384 AC012313.1-201ENST00000593393 3059 ntBASIC17.32■□□□□ 0.36
CAPN1P07384 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CAPN1P07384 KRT89P-201ENST00000620027 1478 ntBASIC17.31■□□□□ 0.36
CAPN1P07384 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CAPN1P07384 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CAPN1P07384 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CAPN1P07384 AC009949.1-201ENST00000623048 1830 ntBASIC17.31■□□□□ 0.36
CAPN1P07384 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CAPN1P07384 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CAPN1P07384 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CAPN1P07384 SIRPAP1-201ENST00000448467 1770 ntBASIC17.31■□□□□ 0.36
CAPN1P07384 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CAPN1P07384 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CAPN1P07384 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.31■□□□□ 0.36
CAPN1P07384 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CAPN1P07384 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CAPN1P07384 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CAPN1P07384 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CAPN1P07384 AC026396.1-201ENST00000419388 421 ntBASIC17.31■□□□□ 0.36
CAPN1P07384 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.31■□□□□ 0.36
CAPN1P07384 UNC93B7-201ENST00000509439 705 ntBASIC17.31■□□□□ 0.36
CAPN1P07384 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.31■□□□□ 0.36
CAPN1P07384 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CAPN1P07384 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.31■□□□□ 0.36
CAPN1P07384 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CAPN1P07384 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.31■□□□□ 0.36
CAPN1P07384 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CAPN1P07384 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CAPN1P07384 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CAPN1P07384 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CAPN1P07384 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CAPN1P07384 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.31■□□□□ 0.36
CAPN1P07384 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.31■□□□□ 0.36
CAPN1P07384 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CAPN1P07384 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.3■□□□□ 0.36
CAPN1P07384 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.3■□□□□ 0.36
CAPN1P07384 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CAPN1P07384 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CAPN1P07384 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CAPN1P07384 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CAPN1P07384 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.3■□□□□ 0.36
CAPN1P07384 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CAPN1P07384 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CAPN1P07384 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CAPN1P07384 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.3■□□□□ 0.36
CAPN1P07384 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.3■□□□□ 0.36
CAPN1P07384 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CAPN1P07384 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CAPN1P07384 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CAPN1P07384 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CAPN1P07384 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.3■□□□□ 0.36
CAPN1P07384 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CAPN1P07384 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CAPN1P07384 KRT18P65-201ENST00000439811 1286 ntBASIC17.3■□□□□ 0.36
CAPN1P07384 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.3■□□□□ 0.36
CAPN1P07384 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.3■□□□□ 0.36
CAPN1P07384 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.3■□□□□ 0.36
CAPN1P07384 AC090616.6-201ENST00000582640 721 ntBASIC17.3■□□□□ 0.36
CAPN1P07384 AC116407.2-201ENST00000613639 860 ntBASIC17.3■□□□□ 0.36
CAPN1P07384 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CAPN1P07384 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CAPN1P07384 AL691432.3-201ENST00000621860 400 ntBASIC17.3■□□□□ 0.36
CAPN1P07384 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.3■□□□□ 0.36
CAPN1P07384 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.3■□□□□ 0.36
CAPN1P07384 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CAPN1P07384 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CAPN1P07384 LINC00304-203ENST00000565008 1864 ntBASIC17.3■□□□□ 0.36
CAPN1P07384 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CAPN1P07384 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CAPN1P07384 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CAPN1P07384 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CAPN1P07384 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.3■□□□□ 0.36
CAPN1P07384 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CAPN1P07384 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
CAPN1P07384 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CAPN1P07384 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.3■□□□□ 0.36
CAPN1P07384 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CAPN1P07384 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.3■□□□□ 0.36
CAPN1P07384 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CAPN1P07384 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CAPN1P07384 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.3■□□□□ 0.36
CAPN1P07384 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CAPN1P07384 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CAPN1P07384 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CAPN1P07384 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CAPN1P07384 LINC00265-3P-201ENST00000447588 903 ntBASIC17.29■□□□□ 0.36
CAPN1P07384 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms