Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CTSDP07339 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CTSDP07339 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CTSDP07339 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC14.6□□□□□ -0.07
CTSDP07339 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CTSDP07339 BAALC-201ENST00000297574 801 ntTSL 3 BASIC14.6□□□□□ -0.07
CTSDP07339 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CTSDP07339 HIST1H2APS4-201ENST00000362070 348 ntBASIC14.6□□□□□ -0.07
CTSDP07339 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CTSDP07339 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CTSDP07339 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC14.6□□□□□ -0.07
CTSDP07339 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CTSDP07339 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CTSDP07339 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC14.6□□□□□ -0.07
CTSDP07339 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC14.6□□□□□ -0.07
CTSDP07339 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CTSDP07339 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
CTSDP07339 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CTSDP07339 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.6□□□□□ -0.07
CTSDP07339 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC14.6□□□□□ -0.07
CTSDP07339 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.6□□□□□ -0.07
CTSDP07339 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CTSDP07339 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CTSDP07339 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CTSDP07339 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CTSDP07339 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CTSDP07339 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CTSDP07339 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CTSDP07339 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CTSDP07339 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CTSDP07339 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC14.59□□□□□ -0.07
CTSDP07339 AC046185.3-201ENST00000623228 1824 ntBASIC14.59□□□□□ -0.07
CTSDP07339 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CTSDP07339 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
CTSDP07339 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CTSDP07339 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
CTSDP07339 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CTSDP07339 FER1L4-210ENST00000615531 5998 ntBASIC14.59□□□□□ -0.07
CTSDP07339 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
CTSDP07339 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.59□□□□□ -0.07
CTSDP07339 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CTSDP07339 PBK-203ENST00000522944 1499 ntTSL 2 BASIC14.59□□□□□ -0.07
CTSDP07339 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC14.59□□□□□ -0.07
CTSDP07339 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CTSDP07339 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.59□□□□□ -0.07
CTSDP07339 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CTSDP07339 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
CTSDP07339 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CTSDP07339 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC14.59□□□□□ -0.07
CTSDP07339 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CTSDP07339 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.59□□□□□ -0.07
CTSDP07339 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC14.59□□□□□ -0.07
CTSDP07339 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC14.59□□□□□ -0.07
CTSDP07339 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC14.59□□□□□ -0.07
CTSDP07339 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.59□□□□□ -0.07
CTSDP07339 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CTSDP07339 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CTSDP07339 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CTSDP07339 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CTSDP07339 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.59□□□□□ -0.07
CTSDP07339 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CTSDP07339 MME-217ENST00000616757 1315 ntTSL 5 BASIC14.59□□□□□ -0.07
CTSDP07339 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CTSDP07339 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CTSDP07339 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CTSDP07339 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CTSDP07339 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CTSDP07339 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
CTSDP07339 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
CTSDP07339 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CTSDP07339 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.58□□□□□ -0.07
CTSDP07339 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.07
CTSDP07339 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CTSDP07339 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CTSDP07339 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.58□□□□□ -0.08
CTSDP07339 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC14.58□□□□□ -0.08
CTSDP07339 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CTSDP07339 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CTSDP07339 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CTSDP07339 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CTSDP07339 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.58□□□□□ -0.08
CTSDP07339 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CTSDP07339 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CTSDP07339 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.08
CTSDP07339 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CTSDP07339 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CTSDP07339 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CTSDP07339 PVRIG2P-201ENST00000435460 978 ntBASIC14.58□□□□□ -0.08
CTSDP07339 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CTSDP07339 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CTSDP07339 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC14.58□□□□□ -0.08
CTSDP07339 MIR3917-201ENST00000580971 93 ntBASIC14.58□□□□□ -0.08
CTSDP07339 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CTSDP07339 AL139327.4-201ENST00000612362 153 ntBASIC14.58□□□□□ -0.08
CTSDP07339 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.58□□□□□ -0.08
CTSDP07339 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.58□□□□□ -0.08
CTSDP07339 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CTSDP07339 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.58□□□□□ -0.08
CTSDP07339 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
CTSDP07339 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms