Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD74P04233 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC14.78□□□□□ -0.04
CD74P04233 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CD74P04233 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CD74P04233 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CD74P04233 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD74P04233 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CD74P04233 SEC1P-202ENST00000473944 940 ntBASIC14.78□□□□□ -0.04
CD74P04233 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC14.78□□□□□ -0.04
CD74P04233 AP005242.2-201ENST00000580065 1175 ntBASIC14.78□□□□□ -0.04
CD74P04233 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CD74P04233 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC14.78□□□□□ -0.04
CD74P04233 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD74P04233 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CD74P04233 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD74P04233 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.78□□□□□ -0.04
CD74P04233 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.78□□□□□ -0.04
CD74P04233 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD74P04233 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD74P04233 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.78□□□□□ -0.04
CD74P04233 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC14.78□□□□□ -0.04
CD74P04233 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD74P04233 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.78□□□□□ -0.04
CD74P04233 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD74P04233 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CD74P04233 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD74P04233 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CD74P04233 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.78□□□□□ -0.04
CD74P04233 AC093525.9-201ENST00000624961 1746 ntBASIC14.78□□□□□ -0.04
CD74P04233 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CD74P04233 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD74P04233 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD74P04233 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD74P04233 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD74P04233 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CD74P04233 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD74P04233 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD74P04233 KRT8P9-201ENST00000558927 1449 ntBASIC14.77□□□□□ -0.04
CD74P04233 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD74P04233 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.77□□□□□ -0.04
CD74P04233 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
CD74P04233 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.77□□□□□ -0.04
CD74P04233 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
CD74P04233 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD74P04233 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.77□□□□□ -0.04
CD74P04233 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD74P04233 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD74P04233 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC14.77□□□□□ -0.05
CD74P04233 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CD74P04233 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CD74P04233 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD74P04233 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC14.77□□□□□ -0.05
CD74P04233 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC14.77□□□□□ -0.05
CD74P04233 ADM-205ENST00000528544 586 ntTSL 2 BASIC14.77□□□□□ -0.05
CD74P04233 C1QBPP2-201ENST00000528754 825 ntBASIC14.77□□□□□ -0.05
CD74P04233 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC14.77□□□□□ -0.05
CD74P04233 EMC9-206ENST00000560403 872 ntTSL 2 BASIC14.77□□□□□ -0.05
CD74P04233 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD74P04233 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC14.77□□□□□ -0.05
CD74P04233 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CD74P04233 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD74P04233 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD74P04233 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD74P04233 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC14.77□□□□□ -0.05
CD74P04233 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD74P04233 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.77□□□□□ -0.05
CD74P04233 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.77□□□□□ -0.05
CD74P04233 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD74P04233 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD74P04233 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD74P04233 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD74P04233 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD74P04233 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CD74P04233 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CD74P04233 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD74P04233 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CD74P04233 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CD74P04233 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD74P04233 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD74P04233 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC14.76□□□□□ -0.05
CD74P04233 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC14.76□□□□□ -0.05
CD74P04233 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CD74P04233 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CD74P04233 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD74P04233 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD74P04233 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD74P04233 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CD74P04233 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.76□□□□□ -0.05
CD74P04233 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
CD74P04233 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD74P04233 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC14.76□□□□□ -0.05
CD74P04233 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CD74P04233 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CD74P04233 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD74P04233 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC14.76□□□□□ -0.05
CD74P04233 GRAMD4P8-201ENST00000605465 1115 ntBASIC14.76□□□□□ -0.05
CD74P04233 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD74P04233 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CD74P04233 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.76□□□□□ -0.05
CD74P04233 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms