Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.8■□□□□ 0.12
HLA-DQA2P01906 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DQA2P01906 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DQA2P01906 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DQA2P01906 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC15.8■□□□□ 0.12
HLA-DQA2P01906 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.8■□□□□ 0.12
HLA-DQA2P01906 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DQA2P01906 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DQA2P01906 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DQA2P01906 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DQA2P01906 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DQA2P01906 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DQA2P01906 STARP1-201ENST00000397973 869 ntBASIC15.8■□□□□ 0.12
HLA-DQA2P01906 SPDYE15P-201ENST00000424157 909 ntBASIC15.8■□□□□ 0.12
HLA-DQA2P01906 YBX1P2-201ENST00000489612 999 ntBASIC15.8■□□□□ 0.12
HLA-DQA2P01906 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.8■□□□□ 0.12
HLA-DQA2P01906 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
HLA-DQA2P01906 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.8■□□□□ 0.12
HLA-DQA2P01906 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.8■□□□□ 0.12
HLA-DQA2P01906 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DQA2P01906 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.8■□□□□ 0.12
HLA-DQA2P01906 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DQA2P01906 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DQA2P01906 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DQA2P01906 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DQA2P01906 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DQA2P01906 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.8■□□□□ 0.12
HLA-DQA2P01906 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.8■□□□□ 0.12
HLA-DQA2P01906 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
HLA-DQA2P01906 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
HLA-DQA2P01906 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DQA2P01906 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DQA2P01906 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DQA2P01906 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
HLA-DQA2P01906 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DQA2P01906 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DQA2P01906 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
HLA-DQA2P01906 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DQA2P01906 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DQA2P01906 CROCCP2-202ENST00000412962 2773 ntBASIC15.79■□□□□ 0.12
HLA-DQA2P01906 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.79■□□□□ 0.12
HLA-DQA2P01906 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DQA2P01906 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DQA2P01906 TERF1P1-201ENST00000311003 1181 ntBASIC15.79■□□□□ 0.12
HLA-DQA2P01906 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC15.79■□□□□ 0.12
HLA-DQA2P01906 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DQA2P01906 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC15.79■□□□□ 0.12
HLA-DQA2P01906 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.79■□□□□ 0.12
HLA-DQA2P01906 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
HLA-DQA2P01906 DDX43P3-201ENST00000441064 443 ntBASIC15.79■□□□□ 0.12
HLA-DQA2P01906 AP003733.1-201ENST00000491725 852 ntBASIC15.79■□□□□ 0.12
HLA-DQA2P01906 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.79■□□□□ 0.12
HLA-DQA2P01906 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DQA2P01906 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.79■□□□□ 0.12
HLA-DQA2P01906 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DQA2P01906 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC15.79■□□□□ 0.12
HLA-DQA2P01906 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
HLA-DQA2P01906 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
HLA-DQA2P01906 AC009154.2-201ENST00000621177 724 ntBASIC15.79■□□□□ 0.12
HLA-DQA2P01906 LINC01451-201ENST00000623792 534 ntBASIC15.79■□□□□ 0.12
HLA-DQA2P01906 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DQA2P01906 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DQA2P01906 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.79■□□□□ 0.12
HLA-DQA2P01906 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.79■□□□□ 0.12
HLA-DQA2P01906 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DQA2P01906 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DQA2P01906 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DQA2P01906 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DQA2P01906 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DQA2P01906 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DQA2P01906 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
HLA-DQA2P01906 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DQA2P01906 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DQA2P01906 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
HLA-DQA2P01906 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
HLA-DQA2P01906 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
HLA-DQA2P01906 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DQA2P01906 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DQA2P01906 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
HLA-DQA2P01906 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DQA2P01906 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
HLA-DQA2P01906 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DQA2P01906 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DQA2P01906 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
HLA-DQA2P01906 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DQA2P01906 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DQA2P01906 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DQA2P01906 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DQA2P01906 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
HLA-DQA2P01906 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DQA2P01906 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.78■□□□□ 0.12
HLA-DQA2P01906 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DQA2P01906 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DQA2P01906 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DQA2P01906 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DQA2P01906 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DQA2P01906 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DQA2P01906 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.78■□□□□ 0.12
HLA-DQA2P01906 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.78■□□□□ 0.12
HLA-DQA2P01906 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms