Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
TRBV12-3P01733 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
TRBV12-3P01733 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV12-3P01733 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV12-3P01733 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC13.57□□□□□ -0.24
TRBV12-3P01733 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
TRBV12-3P01733 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV12-3P01733 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV12-3P01733 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV12-3P01733 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV12-3P01733 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
TRBV12-3P01733 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV12-3P01733 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV12-3P01733 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
TRBV12-3P01733 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV12-3P01733 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC13.57□□□□□ -0.24
TRBV12-3P01733 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV12-3P01733 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV12-3P01733 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV12-3P01733 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV12-3P01733 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV12-3P01733 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV12-3P01733 DFFB-203ENST00000341385 572 ntTSL 5 BASIC13.57□□□□□ -0.24
TRBV12-3P01733 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV12-3P01733 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
TRBV12-3P01733 AC005104.2-201ENST00000427818 678 ntBASIC13.57□□□□□ -0.24
TRBV12-3P01733 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC13.57□□□□□ -0.24
TRBV12-3P01733 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC13.57□□□□□ -0.24
TRBV12-3P01733 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC13.57□□□□□ -0.24
TRBV12-3P01733 GZMM-202ENST00000592501 941 ntTSL 3 BASIC13.57□□□□□ -0.24
TRBV12-3P01733 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC13.57□□□□□ -0.24
TRBV12-3P01733 LINC01451-201ENST00000623792 534 ntBASIC13.57□□□□□ -0.24
TRBV12-3P01733 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC13.57□□□□□ -0.24
TRBV12-3P01733 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
TRBV12-3P01733 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV12-3P01733 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV12-3P01733 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
TRBV12-3P01733 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
TRBV12-3P01733 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV12-3P01733 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV12-3P01733 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV12-3P01733 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV12-3P01733 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV12-3P01733 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC13.57□□□□□ -0.24
TRBV12-3P01733 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV12-3P01733 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV12-3P01733 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
TRBV12-3P01733 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC13.57□□□□□ -0.24
TRBV12-3P01733 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV12-3P01733 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV12-3P01733 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC13.57□□□□□ -0.24
TRBV12-3P01733 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
TRBV12-3P01733 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC13.57□□□□□ -0.24
TRBV12-3P01733 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV12-3P01733 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV12-3P01733 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV12-3P01733 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV12-3P01733 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC13.56□□□□□ -0.24
TRBV12-3P01733 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC13.56□□□□□ -0.24
TRBV12-3P01733 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC13.56□□□□□ -0.24
TRBV12-3P01733 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC13.56□□□□□ -0.24
TRBV12-3P01733 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
TRBV12-3P01733 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV12-3P01733 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV12-3P01733 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV12-3P01733 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV12-3P01733 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC13.56□□□□□ -0.24
TRBV12-3P01733 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC13.56□□□□□ -0.24
TRBV12-3P01733 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
TRBV12-3P01733 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV12-3P01733 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV12-3P01733 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV12-3P01733 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV12-3P01733 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV12-3P01733 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV12-3P01733 EMD-201ENST00000369835 966 ntTSL 3 BASIC13.56□□□□□ -0.24
TRBV12-3P01733 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV12-3P01733 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
TRBV12-3P01733 CTNS-203ENST00000399306 803 ntTSL 3 BASIC13.56□□□□□ -0.24
TRBV12-3P01733 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV12-3P01733 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV12-3P01733 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC13.56□□□□□ -0.24
TRBV12-3P01733 TPM1-218ENST00000559281 851 ntTSL 5 BASIC13.56□□□□□ -0.24
TRBV12-3P01733 COX5A-204ENST00000567270 579 ntTSL 3 BASIC13.56□□□□□ -0.24
TRBV12-3P01733 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC13.56□□□□□ -0.24
TRBV12-3P01733 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
TRBV12-3P01733 AP001269.4-201ENST00000609611 512 ntBASIC13.56□□□□□ -0.24
TRBV12-3P01733 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC13.56□□□□□ -0.24
TRBV12-3P01733 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV12-3P01733 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV12-3P01733 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV12-3P01733 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV12-3P01733 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC13.56□□□□□ -0.24
TRBV12-3P01733 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC13.56□□□□□ -0.24
TRBV12-3P01733 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV12-3P01733 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV12-3P01733 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC13.56□□□□□ -0.24
TRBV12-3P01733 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC13.56□□□□□ -0.24
TRBV12-3P01733 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV12-3P01733 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms