Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC15.69■□□□□ 0.1
CLDN1O95832 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN1O95832 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN1O95832 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN1O95832 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN1O95832 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.68■□□□□ 0.1
CLDN1O95832 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN1O95832 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CLDN1O95832 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CLDN1O95832 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN1O95832 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CLDN1O95832 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN1O95832 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN1O95832 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN1O95832 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
CLDN1O95832 AC005082.1-201ENST00000413042 2259 ntBASIC15.68■□□□□ 0.1
CLDN1O95832 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC15.68■□□□□ 0.1
CLDN1O95832 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN1O95832 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN1O95832 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.68■□□□□ 0.1
CLDN1O95832 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN1O95832 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN1O95832 GPR89P-201ENST00000407924 1495 ntBASIC15.68■□□□□ 0.1
CLDN1O95832 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.68■□□□□ 0.1
CLDN1O95832 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN1O95832 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN1O95832 CRYGEP-201ENST00000412192 528 ntBASIC15.68■□□□□ 0.1
CLDN1O95832 PRSS29P-201ENST00000440800 595 ntBASIC15.68■□□□□ 0.1
CLDN1O95832 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.68■□□□□ 0.1
CLDN1O95832 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.68■□□□□ 0.1
CLDN1O95832 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN1O95832 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.68■□□□□ 0.1
CLDN1O95832 AL031432.2-201ENST00000566714 459 ntBASIC15.68■□□□□ 0.1
CLDN1O95832 AL928711.1-201ENST00000570165 459 ntBASIC15.68■□□□□ 0.1
CLDN1O95832 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.68■□□□□ 0.1
CLDN1O95832 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.68■□□□□ 0.1
CLDN1O95832 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.68■□□□□ 0.1
CLDN1O95832 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.68■□□□□ 0.1
CLDN1O95832 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN1O95832 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN1O95832 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN1O95832 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC15.68■□□□□ 0.1
CLDN1O95832 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
CLDN1O95832 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN1O95832 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN1O95832 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.68■□□□□ 0.1
CLDN1O95832 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CLDN1O95832 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CLDN1O95832 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN1O95832 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CLDN1O95832 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC15.67■□□□□ 0.1
CLDN1O95832 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN1O95832 AC104581.1-202ENST00000635932 2618 ntBASIC15.67■□□□□ 0.1
CLDN1O95832 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN1O95832 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CLDN1O95832 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN1O95832 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CLDN1O95832 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
CLDN1O95832 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CLDN1O95832 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CLDN1O95832 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CLDN1O95832 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN1O95832 MIR149-201ENST00000384879 89 ntBASIC15.67■□□□□ 0.1
CLDN1O95832 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.67■□□□□ 0.1
CLDN1O95832 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.67■□□□□ 0.1
CLDN1O95832 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.67■□□□□ 0.1
CLDN1O95832 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.67■□□□□ 0.1
CLDN1O95832 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.67■□□□□ 0.1
CLDN1O95832 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.67■□□□□ 0.1
CLDN1O95832 MIR4745-201ENST00000577608 62 ntBASIC15.67■□□□□ 0.1
CLDN1O95832 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CLDN1O95832 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.67■□□□□ 0.1
CLDN1O95832 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN1O95832 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CLDN1O95832 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN1O95832 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN1O95832 AC079776.2-201ENST00000641154 1609 ntBASIC15.67■□□□□ 0.1
CLDN1O95832 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN1O95832 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN1O95832 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN1O95832 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN1O95832 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN1O95832 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN1O95832 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN1O95832 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CLDN1O95832 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN1O95832 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN1O95832 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC15.67■□□□□ 0.1
CLDN1O95832 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN1O95832 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN1O95832 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN1O95832 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC15.66■□□□□ 0.1
CLDN1O95832 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.66■□□□□ 0.1
CLDN1O95832 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN1O95832 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN1O95832 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN1O95832 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN1O95832 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN1O95832 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN1O95832 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms