Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CBX6O95503 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CBX6O95503 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.55■□□□□ 0.4
CBX6O95503 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.55■□□□□ 0.4
CBX6O95503 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CBX6O95503 AC092338.2-201ENST00000568827 1415 ntBASIC17.55■□□□□ 0.4
CBX6O95503 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.55■□□□□ 0.4
CBX6O95503 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.55■□□□□ 0.4
CBX6O95503 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CBX6O95503 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CBX6O95503 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CBX6O95503 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CBX6O95503 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CBX6O95503 IER3-202ENST00000376377 1350 ntBASIC17.54■□□□□ 0.4
CBX6O95503 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
CBX6O95503 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CBX6O95503 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.54■□□□□ 0.4
CBX6O95503 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CBX6O95503 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
CBX6O95503 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CBX6O95503 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CBX6O95503 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CBX6O95503 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CBX6O95503 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CBX6O95503 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CBX6O95503 PCDHA1-201ENST00000378133 2726 ntBASIC17.54■□□□□ 0.4
CBX6O95503 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CBX6O95503 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CBX6O95503 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CBX6O95503 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CBX6O95503 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CBX6O95503 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CBX6O95503 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.54■□□□□ 0.4
CBX6O95503 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.54■□□□□ 0.4
CBX6O95503 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CBX6O95503 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.54■□□□□ 0.4
CBX6O95503 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CBX6O95503 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.54■□□□□ 0.4
CBX6O95503 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.54■□□□□ 0.4
CBX6O95503 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CBX6O95503 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CBX6O95503 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.54■□□□□ 0.4
CBX6O95503 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CBX6O95503 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CBX6O95503 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CBX6O95503 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CBX6O95503 AC100803.2-201ENST00000562459 1963 ntBASIC17.53■□□□□ 0.4
CBX6O95503 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CBX6O95503 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CBX6O95503 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CBX6O95503 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CBX6O95503 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CBX6O95503 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CBX6O95503 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CBX6O95503 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.53■□□□□ 0.4
CBX6O95503 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CBX6O95503 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CBX6O95503 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.53■□□□□ 0.4
CBX6O95503 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CBX6O95503 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CBX6O95503 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.53■□□□□ 0.4
CBX6O95503 MIR564-202ENST00000385049 94 ntBASIC17.53■□□□□ 0.4
CBX6O95503 DUSP5P1-201ENST00000441325 1139 ntBASIC17.53■□□□□ 0.4
CBX6O95503 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.53■□□□□ 0.4
CBX6O95503 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.53■□□□□ 0.4
CBX6O95503 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.53■□□□□ 0.4
CBX6O95503 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.53■□□□□ 0.4
CBX6O95503 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CBX6O95503 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CBX6O95503 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CBX6O95503 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CBX6O95503 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
CBX6O95503 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CBX6O95503 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CBX6O95503 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CBX6O95503 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CBX6O95503 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CBX6O95503 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CBX6O95503 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CBX6O95503 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CBX6O95503 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CBX6O95503 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CBX6O95503 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CBX6O95503 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
CBX6O95503 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
CBX6O95503 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CBX6O95503 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CBX6O95503 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.52■□□□□ 0.4
CBX6O95503 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CBX6O95503 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CBX6O95503 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CBX6O95503 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.52■□□□□ 0.4
CBX6O95503 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.52■□□□□ 0.4
CBX6O95503 AC026396.1-201ENST00000419388 421 ntBASIC17.52■□□□□ 0.4
CBX6O95503 TSPY17P-201ENST00000450329 467 ntBASIC17.52■□□□□ 0.4
CBX6O95503 HOMER2P1-201ENST00000455653 964 ntBASIC17.52■□□□□ 0.4
CBX6O95503 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.52■□□□□ 0.4
CBX6O95503 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.52■□□□□ 0.4
CBX6O95503 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.52■□□□□ 0.4
CBX6O95503 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms