Protein–RNA interactions for Protein: O95167

NDUFA3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3O95167 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NDUFA3O95167 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NDUFA3O95167 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NDUFA3O95167 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NDUFA3O95167 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NDUFA3O95167 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
NDUFA3O95167 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
NDUFA3O95167 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NDUFA3O95167 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.06□□□□□ -0.16
NDUFA3O95167 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NDUFA3O95167 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NDUFA3O95167 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
NDUFA3O95167 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NDUFA3O95167 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NDUFA3O95167 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
NDUFA3O95167 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NDUFA3O95167 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
NDUFA3O95167 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NDUFA3O95167 TP73-AS1-210ENST00000637775 1455 ntBASIC14.06□□□□□ -0.16
NDUFA3O95167 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFA3O95167 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFA3O95167 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
NDUFA3O95167 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFA3O95167 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFA3O95167 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
NDUFA3O95167 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFA3O95167 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFA3O95167 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFA3O95167 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFA3O95167 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
NDUFA3O95167 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFA3O95167 POM121L3P-201ENST00000419331 1163 ntBASIC14.05□□□□□ -0.16
NDUFA3O95167 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFA3O95167 AP000867.3-201ENST00000524675 377 ntBASIC14.05□□□□□ -0.16
NDUFA3O95167 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFA3O95167 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFA3O95167 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC14.05□□□□□ -0.16
NDUFA3O95167 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
NDUFA3O95167 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC14.05□□□□□ -0.16
NDUFA3O95167 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC14.05□□□□□ -0.16
NDUFA3O95167 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFA3O95167 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
NDUFA3O95167 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFA3O95167 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
NDUFA3O95167 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.05□□□□□ -0.16
NDUFA3O95167 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFA3O95167 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.05□□□□□ -0.16
NDUFA3O95167 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.05□□□□□ -0.16
NDUFA3O95167 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
NDUFA3O95167 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
NDUFA3O95167 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFA3O95167 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
NDUFA3O95167 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFA3O95167 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFA3O95167 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFA3O95167 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFA3O95167 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFA3O95167 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
NDUFA3O95167 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFA3O95167 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFA3O95167 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.04□□□□□ -0.16
NDUFA3O95167 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFA3O95167 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC14.04□□□□□ -0.16
NDUFA3O95167 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFA3O95167 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFA3O95167 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFA3O95167 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC14.04□□□□□ -0.16
NDUFA3O95167 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFA3O95167 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
NDUFA3O95167 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFA3O95167 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.04□□□□□ -0.16
NDUFA3O95167 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC14.04□□□□□ -0.16
NDUFA3O95167 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
NDUFA3O95167 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFA3O95167 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
NDUFA3O95167 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC14.04□□□□□ -0.16
NDUFA3O95167 IGHV3-52-201ENST00000519770 353 ntBASIC14.04□□□□□ -0.16
NDUFA3O95167 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.04□□□□□ -0.16
NDUFA3O95167 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.04□□□□□ -0.16
NDUFA3O95167 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.04□□□□□ -0.16
NDUFA3O95167 AC114341.1-201ENST00000618070 349 ntBASIC14.04□□□□□ -0.16
NDUFA3O95167 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFA3O95167 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC14.04□□□□□ -0.16
NDUFA3O95167 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
NDUFA3O95167 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC14.04□□□□□ -0.16
NDUFA3O95167 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFA3O95167 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
NDUFA3O95167 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
NDUFA3O95167 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.04□□□□□ -0.16
NDUFA3O95167 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFA3O95167 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFA3O95167 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.04□□□□□ -0.16
NDUFA3O95167 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFA3O95167 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC14.04□□□□□ -0.16
NDUFA3O95167 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFA3O95167 INTS4P1-201ENST00000438455 1935 ntBASIC14.03□□□□□ -0.16
NDUFA3O95167 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA3O95167 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC14.03□□□□□ -0.16
NDUFA3O95167 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA3O95167 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms