Protein–RNA interactions for Protein: O75678

RFPL2, Ret finger protein-like 2, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL2O75678 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFPL2O75678 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RFPL2O75678 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFPL2O75678 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
RFPL2O75678 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.3■□□□□ 0.52
RFPL2O75678 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFPL2O75678 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RFPL2O75678 AP002414.1-201ENST00000391405 1147 ntBASIC18.3■□□□□ 0.52
RFPL2O75678 DDX43P3-201ENST00000441064 443 ntBASIC18.3■□□□□ 0.52
RFPL2O75678 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFPL2O75678 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.3■□□□□ 0.52
RFPL2O75678 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.3■□□□□ 0.52
RFPL2O75678 AP002472.1-201ENST00000577490 586 ntBASIC18.3■□□□□ 0.52
RFPL2O75678 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.3■□□□□ 0.52
RFPL2O75678 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RFPL2O75678 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFPL2O75678 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFPL2O75678 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RFPL2O75678 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFPL2O75678 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
RFPL2O75678 AC025580.3-201ENST00000617932 1424 ntBASIC18.3■□□□□ 0.52
RFPL2O75678 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RFPL2O75678 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
RFPL2O75678 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFPL2O75678 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RFPL2O75678 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RFPL2O75678 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RFPL2O75678 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFPL2O75678 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
RFPL2O75678 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.29■□□□□ 0.52
RFPL2O75678 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFPL2O75678 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.29■□□□□ 0.52
RFPL2O75678 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFPL2O75678 NEFHP1-201ENST00000412845 2629 ntBASIC18.29■□□□□ 0.52
RFPL2O75678 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
RFPL2O75678 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
RFPL2O75678 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFPL2O75678 AC093503.3-201ENST00000624917 2352 ntBASIC18.29■□□□□ 0.52
RFPL2O75678 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFPL2O75678 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFPL2O75678 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.29■□□□□ 0.52
RFPL2O75678 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.29■□□□□ 0.52
RFPL2O75678 RHOQP3-201ENST00000437982 621 ntBASIC18.29■□□□□ 0.52
RFPL2O75678 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RFPL2O75678 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
RFPL2O75678 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.29■□□□□ 0.52
RFPL2O75678 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.29■□□□□ 0.52
RFPL2O75678 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
RFPL2O75678 AC027612.4-201ENST00000605371 583 ntBASIC18.29■□□□□ 0.52
RFPL2O75678 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.29■□□□□ 0.52
RFPL2O75678 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RFPL2O75678 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFPL2O75678 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.29■□□□□ 0.52
RFPL2O75678 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RFPL2O75678 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFPL2O75678 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFPL2O75678 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RFPL2O75678 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFPL2O75678 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFPL2O75678 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
RFPL2O75678 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFPL2O75678 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RFPL2O75678 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
RFPL2O75678 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.28■□□□□ 0.52
RFPL2O75678 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFPL2O75678 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.28■□□□□ 0.52
RFPL2O75678 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.28■□□□□ 0.52
RFPL2O75678 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.28■□□□□ 0.52
RFPL2O75678 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
RFPL2O75678 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.28■□□□□ 0.52
RFPL2O75678 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.28■□□□□ 0.52
RFPL2O75678 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.28■□□□□ 0.52
RFPL2O75678 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.28■□□□□ 0.52
RFPL2O75678 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.28■□□□□ 0.52
RFPL2O75678 AC106028.4-201ENST00000614509 607 ntBASIC18.28■□□□□ 0.52
RFPL2O75678 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.28■□□□□ 0.52
RFPL2O75678 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFPL2O75678 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RFPL2O75678 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFPL2O75678 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFPL2O75678 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.28■□□□□ 0.52
RFPL2O75678 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.27■□□□□ 0.52
RFPL2O75678 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFPL2O75678 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RFPL2O75678 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
RFPL2O75678 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RFPL2O75678 PI4KAP1-204ENST00000612579 1703 ntBASIC18.27■□□□□ 0.52
RFPL2O75678 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.27■□□□□ 0.52
RFPL2O75678 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.27■□□□□ 0.52
RFPL2O75678 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFPL2O75678 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC18.27■□□□□ 0.52
RFPL2O75678 AL645939.2-201ENST00000427340 991 ntBASIC18.27■□□□□ 0.52
RFPL2O75678 FAM58CP-201ENST00000435741 640 ntBASIC18.27■□□□□ 0.52
RFPL2O75678 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RFPL2O75678 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.27■□□□□ 0.52
RFPL2O75678 GGTLC5P-201ENST00000617623 998 ntBASIC18.27■□□□□ 0.52
RFPL2O75678 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.27■□□□□ 0.52
RFPL2O75678 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFPL2O75678 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
RFPL2O75678 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms