Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
KLHL41O60662 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KLHL41O60662 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.46■□□□□ 0.39
KLHL41O60662 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
KLHL41O60662 AL118508.1-201ENST00000613502 2345 ntBASIC17.46■□□□□ 0.39
KLHL41O60662 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KLHL41O60662 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
KLHL41O60662 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.46■□□□□ 0.39
KLHL41O60662 KRT18P38-201ENST00000449496 1282 ntBASIC17.46■□□□□ 0.39
KLHL41O60662 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.46■□□□□ 0.39
KLHL41O60662 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
KLHL41O60662 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KLHL41O60662 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.46■□□□□ 0.39
KLHL41O60662 CR769767.2-201ENST00000622735 460 ntBASIC17.46■□□□□ 0.39
KLHL41O60662 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.46■□□□□ 0.39
KLHL41O60662 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.46■□□□□ 0.39
KLHL41O60662 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KLHL41O60662 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KLHL41O60662 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
KLHL41O60662 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
KLHL41O60662 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.46■□□□□ 0.39
KLHL41O60662 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
KLHL41O60662 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.38
KLHL41O60662 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
KLHL41O60662 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
KLHL41O60662 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
KLHL41O60662 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KLHL41O60662 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
KLHL41O60662 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.45■□□□□ 0.38
KLHL41O60662 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
KLHL41O60662 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
KLHL41O60662 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
KLHL41O60662 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KLHL41O60662 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.45■□□□□ 0.38
KLHL41O60662 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
KLHL41O60662 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
KLHL41O60662 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
KLHL41O60662 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KLHL41O60662 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
KLHL41O60662 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KLHL41O60662 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KLHL41O60662 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.45■□□□□ 0.38
KLHL41O60662 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.45■□□□□ 0.38
KLHL41O60662 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.45■□□□□ 0.38
KLHL41O60662 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.45■□□□□ 0.38
KLHL41O60662 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.45■□□□□ 0.38
KLHL41O60662 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KLHL41O60662 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.45■□□□□ 0.38
KLHL41O60662 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
KLHL41O60662 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
KLHL41O60662 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KLHL41O60662 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KLHL41O60662 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
KLHL41O60662 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
KLHL41O60662 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
KLHL41O60662 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KLHL41O60662 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KLHL41O60662 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.44■□□□□ 0.38
KLHL41O60662 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
KLHL41O60662 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KLHL41O60662 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
KLHL41O60662 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.44■□□□□ 0.38
KLHL41O60662 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
KLHL41O60662 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KLHL41O60662 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
KLHL41O60662 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
KLHL41O60662 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KLHL41O60662 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
KLHL41O60662 LINC00304-203ENST00000565008 1864 ntBASIC17.44■□□□□ 0.38
KLHL41O60662 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
KLHL41O60662 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KLHL41O60662 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
KLHL41O60662 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
KLHL41O60662 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
KLHL41O60662 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.44■□□□□ 0.38
KLHL41O60662 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.44■□□□□ 0.38
KLHL41O60662 TPM4P1-201ENST00000436100 807 ntBASIC17.44■□□□□ 0.38
KLHL41O60662 DUTP2-201ENST00000519164 463 ntBASIC17.44■□□□□ 0.38
KLHL41O60662 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.44■□□□□ 0.38
KLHL41O60662 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
KLHL41O60662 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
KLHL41O60662 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KLHL41O60662 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
KLHL41O60662 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
KLHL41O60662 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
KLHL41O60662 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KLHL41O60662 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KLHL41O60662 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.44■□□□□ 0.38
KLHL41O60662 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
KLHL41O60662 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.43■□□□□ 0.38
KLHL41O60662 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.43■□□□□ 0.38
KLHL41O60662 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
KLHL41O60662 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KLHL41O60662 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
KLHL41O60662 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KLHL41O60662 AC018695.7-201ENST00000624587 2492 ntBASIC17.43■□□□□ 0.38
KLHL41O60662 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KLHL41O60662 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KLHL41O60662 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KLHL41O60662 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms