Protein–RNA interactions for Protein: O60359

CACNG3, Voltage-dependent calcium channel gamma-3 subunit, humanhuman

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNG3O60359 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CACNG3O60359 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.06■□□□□ 0.48
CACNG3O60359 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CACNG3O60359 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CACNG3O60359 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CACNG3O60359 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.06■□□□□ 0.48
CACNG3O60359 AC005104.2-201ENST00000427818 678 ntBASIC18.06■□□□□ 0.48
CACNG3O60359 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.06■□□□□ 0.48
CACNG3O60359 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CACNG3O60359 POLD2P1-201ENST00000511220 997 ntBASIC18.06■□□□□ 0.48
CACNG3O60359 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CACNG3O60359 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.06■□□□□ 0.48
CACNG3O60359 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.06■□□□□ 0.48
CACNG3O60359 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CACNG3O60359 AC006538.3-201ENST00000612495 578 ntBASIC18.06■□□□□ 0.48
CACNG3O60359 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CACNG3O60359 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CACNG3O60359 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CACNG3O60359 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CACNG3O60359 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CACNG3O60359 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CACNG3O60359 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.06■□□□□ 0.48
CACNG3O60359 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CACNG3O60359 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CACNG3O60359 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CACNG3O60359 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.05■□□□□ 0.48
CACNG3O60359 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CACNG3O60359 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CACNG3O60359 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CACNG3O60359 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CACNG3O60359 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.05■□□□□ 0.48
CACNG3O60359 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CACNG3O60359 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CACNG3O60359 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CACNG3O60359 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.05■□□□□ 0.48
CACNG3O60359 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.05■□□□□ 0.48
CACNG3O60359 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.05■□□□□ 0.48
CACNG3O60359 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.05■□□□□ 0.48
CACNG3O60359 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.05■□□□□ 0.48
CACNG3O60359 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.05■□□□□ 0.48
CACNG3O60359 Z83851.2-201ENST00000609564 659 ntBASIC18.05■□□□□ 0.48
CACNG3O60359 AC019129.2-201ENST00000609837 1235 ntBASIC18.05■□□□□ 0.48
CACNG3O60359 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CACNG3O60359 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CACNG3O60359 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CACNG3O60359 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CACNG3O60359 AP002414.3-201ENST00000589352 1468 ntBASIC18.05■□□□□ 0.48
CACNG3O60359 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CACNG3O60359 AC004817.3-201ENST00000602957 2129 ntBASIC18.05■□□□□ 0.48
CACNG3O60359 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.05■□□□□ 0.48
CACNG3O60359 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CACNG3O60359 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CACNG3O60359 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CACNG3O60359 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CACNG3O60359 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CACNG3O60359 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
CACNG3O60359 AC132938.5-201ENST00000624980 1813 ntBASIC18.05■□□□□ 0.48
CACNG3O60359 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CACNG3O60359 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CACNG3O60359 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.04■□□□□ 0.48
CACNG3O60359 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.04■□□□□ 0.48
CACNG3O60359 BX276092.7-203ENST00000637198 1536 ntBASIC18.04■□□□□ 0.48
CACNG3O60359 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.04■□□□□ 0.48
CACNG3O60359 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CACNG3O60359 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CACNG3O60359 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CACNG3O60359 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CACNG3O60359 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CACNG3O60359 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.04■□□□□ 0.48
CACNG3O60359 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.04■□□□□ 0.48
CACNG3O60359 AL020989.1-201ENST00000422979 469 ntBASIC18.04■□□□□ 0.48
CACNG3O60359 KRT18P27-201ENST00000427733 1299 ntBASIC18.04■□□□□ 0.48
CACNG3O60359 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.04■□□□□ 0.48
CACNG3O60359 RNA5SP415-201ENST00000517246 115 ntBASIC18.04■□□□□ 0.48
CACNG3O60359 AC034105.1-201ENST00000563488 319 ntBASIC18.04■□□□□ 0.48
CACNG3O60359 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.04■□□□□ 0.48
CACNG3O60359 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.04■□□□□ 0.48
CACNG3O60359 AC006557.2-201ENST00000592985 1240 ntBASIC18.04■□□□□ 0.48
CACNG3O60359 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CACNG3O60359 GPALPP1-207ENST00000611650 899 ntBASIC18.04■□□□□ 0.48
CACNG3O60359 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.04■□□□□ 0.48
CACNG3O60359 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CACNG3O60359 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CACNG3O60359 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.04■□□□□ 0.48
CACNG3O60359 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
CACNG3O60359 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CACNG3O60359 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.04■□□□□ 0.48
CACNG3O60359 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.04■□□□□ 0.48
CACNG3O60359 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CACNG3O60359 AL138688.1-201ENST00000624851 1594 ntBASIC18.04■□□□□ 0.48
CACNG3O60359 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CACNG3O60359 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CACNG3O60359 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.03■□□□□ 0.48
CACNG3O60359 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CACNG3O60359 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CACNG3O60359 PMS2P7-201ENST00000506558 1336 ntBASIC18.03■□□□□ 0.48
CACNG3O60359 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CACNG3O60359 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CACNG3O60359 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.03■□□□□ 0.48
CACNG3O60359 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms