Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PEX1O43933 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PEX1O43933 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PEX1O43933 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PEX1O43933 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PEX1O43933 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PEX1O43933 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PEX1O43933 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PEX1O43933 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PEX1O43933 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PEX1O43933 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PEX1O43933 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PEX1O43933 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PEX1O43933 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
PEX1O43933 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PEX1O43933 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PEX1O43933 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.17■□□□□ 0.34
PEX1O43933 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PEX1O43933 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PEX1O43933 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PEX1O43933 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PEX1O43933 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.17■□□□□ 0.34
PEX1O43933 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.17■□□□□ 0.34
PEX1O43933 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.17■□□□□ 0.34
PEX1O43933 AL671277.2-201ENST00000458060 996 ntBASIC17.17■□□□□ 0.34
PEX1O43933 GMCL1P1-201ENST00000463439 1581 ntBASIC17.17■□□□□ 0.34
PEX1O43933 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.17■□□□□ 0.34
PEX1O43933 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.17■□□□□ 0.34
PEX1O43933 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PEX1O43933 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PEX1O43933 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PEX1O43933 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PEX1O43933 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PEX1O43933 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PEX1O43933 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PEX1O43933 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.17■□□□□ 0.34
PEX1O43933 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PEX1O43933 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PEX1O43933 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PEX1O43933 CROCCP2-202ENST00000412962 2773 ntBASIC17.17■□□□□ 0.34
PEX1O43933 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PEX1O43933 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PEX1O43933 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PEX1O43933 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PEX1O43933 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PEX1O43933 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PEX1O43933 MST1L-201ENST00000442552 2185 ntBASIC17.16■□□□□ 0.34
PEX1O43933 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.16■□□□□ 0.34
PEX1O43933 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.16■□□□□ 0.34
PEX1O43933 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PEX1O43933 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
PEX1O43933 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PEX1O43933 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PEX1O43933 AC036111.1-201ENST00000533973 1582 ntBASIC17.16■□□□□ 0.34
PEX1O43933 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.16■□□□□ 0.34
PEX1O43933 AL356309.3-201ENST00000624132 1934 ntBASIC17.16■□□□□ 0.34
PEX1O43933 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PEX1O43933 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PEX1O43933 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
PEX1O43933 KRT18P38-201ENST00000449496 1282 ntBASIC17.16■□□□□ 0.34
PEX1O43933 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PEX1O43933 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.16■□□□□ 0.34
PEX1O43933 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.16■□□□□ 0.34
PEX1O43933 MIR3180-5-201ENST00000583743 153 ntBASIC17.16■□□□□ 0.34
PEX1O43933 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PEX1O43933 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.16■□□□□ 0.34
PEX1O43933 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PEX1O43933 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.16■□□□□ 0.34
PEX1O43933 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
PEX1O43933 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PEX1O43933 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PEX1O43933 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PEX1O43933 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PEX1O43933 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.16■□□□□ 0.34
PEX1O43933 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
PEX1O43933 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PEX1O43933 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PEX1O43933 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
PEX1O43933 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PEX1O43933 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.16■□□□□ 0.34
PEX1O43933 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PEX1O43933 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PEX1O43933 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PEX1O43933 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PEX1O43933 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PEX1O43933 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PEX1O43933 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.15■□□□□ 0.34
PEX1O43933 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PEX1O43933 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PEX1O43933 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PEX1O43933 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.15■□□□□ 0.34
PEX1O43933 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PEX1O43933 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
PEX1O43933 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PEX1O43933 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PEX1O43933 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PEX1O43933 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PEX1O43933 KRT18P41-201ENST00000518924 1277 ntBASIC17.15■□□□□ 0.34
PEX1O43933 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
PEX1O43933 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms