Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 AC114341.1-201ENST00000618070 349 ntBASIC15.66■□□□□ 0.1
TRAF3IP2O43734 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TRAF3IP2O43734 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAF3IP2O43734 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAF3IP2O43734 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
TRAF3IP2O43734 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TRAF3IP2O43734 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAF3IP2O43734 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
TRAF3IP2O43734 AC141586.5-201ENST00000624546 2050 ntBASIC15.66■□□□□ 0.1
TRAF3IP2O43734 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAF3IP2O43734 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAF3IP2O43734 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAF3IP2O43734 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TRAF3IP2O43734 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAF3IP2O43734 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAF3IP2O43734 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAF3IP2O43734 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.65■□□□□ 0.1
TRAF3IP2O43734 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAF3IP2O43734 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAF3IP2O43734 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAF3IP2O43734 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAF3IP2O43734 EML3-216ENST00000529309 2909 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAF3IP2O43734 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAF3IP2O43734 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAF3IP2O43734 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAF3IP2O43734 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAF3IP2O43734 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TRAF3IP2O43734 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAF3IP2O43734 INTS4P1-201ENST00000438455 1935 ntBASIC15.65■□□□□ 0.1
TRAF3IP2O43734 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.65■□□□□ 0.1
TRAF3IP2O43734 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAF3IP2O43734 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAF3IP2O43734 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAF3IP2O43734 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TRAF3IP2O43734 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TRAF3IP2O43734 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.65■□□□□ 0.1
TRAF3IP2O43734 AC103564.2-201ENST00000432853 1299 ntBASIC15.65■□□□□ 0.1
TRAF3IP2O43734 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAF3IP2O43734 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
TRAF3IP2O43734 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.65■□□□□ 0.1
TRAF3IP2O43734 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAF3IP2O43734 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAF3IP2O43734 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAF3IP2O43734 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
TRAF3IP2O43734 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.65■□□□□ 0.1
TRAF3IP2O43734 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15.65■□□□□ 0.1
TRAF3IP2O43734 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAF3IP2O43734 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAF3IP2O43734 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAF3IP2O43734 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAF3IP2O43734 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.65■□□□□ 0.1
TRAF3IP2O43734 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAF3IP2O43734 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAF3IP2O43734 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
TRAF3IP2O43734 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TRAF3IP2O43734 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TRAF3IP2O43734 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.65■□□□□ 0.1
TRAF3IP2O43734 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
TRAF3IP2O43734 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.64■□□□□ 0.1
TRAF3IP2O43734 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAF3IP2O43734 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAF3IP2O43734 AL645608.8-201ENST00000606034 2086 ntBASIC15.64■□□□□ 0.09
TRAF3IP2O43734 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
TRAF3IP2O43734 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAF3IP2O43734 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAF3IP2O43734 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAF3IP2O43734 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAF3IP2O43734 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAF3IP2O43734 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAF3IP2O43734 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAF3IP2O43734 MYCLP1-201ENST00000372451 1075 ntBASIC15.64■□□□□ 0.09
TRAF3IP2O43734 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.64■□□□□ 0.09
TRAF3IP2O43734 RCN1P2-201ENST00000398357 915 ntBASIC15.64■□□□□ 0.09
TRAF3IP2O43734 CROCCP2-202ENST00000412962 2773 ntBASIC15.64■□□□□ 0.09
TRAF3IP2O43734 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.64■□□□□ 0.09
TRAF3IP2O43734 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAF3IP2O43734 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.64■□□□□ 0.09
TRAF3IP2O43734 IGHV3-52-201ENST00000519770 353 ntBASIC15.64■□□□□ 0.09
TRAF3IP2O43734 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.64■□□□□ 0.09
TRAF3IP2O43734 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.64■□□□□ 0.09
TRAF3IP2O43734 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.64■□□□□ 0.09
TRAF3IP2O43734 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.64■□□□□ 0.09
TRAF3IP2O43734 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TRAF3IP2O43734 AC099336.1-202ENST00000602961 463 ntBASIC15.64■□□□□ 0.09
TRAF3IP2O43734 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
TRAF3IP2O43734 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.64■□□□□ 0.09
TRAF3IP2O43734 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.64■□□□□ 0.09
TRAF3IP2O43734 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAF3IP2O43734 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAF3IP2O43734 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAF3IP2O43734 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAF3IP2O43734 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAF3IP2O43734 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAF3IP2O43734 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAF3IP2O43734 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAF3IP2O43734 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAF3IP2O43734 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAF3IP2O43734 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.63■□□□□ 0.09
TRAF3IP2O43734 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
TRAF3IP2O43734 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms