Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
NDUFS4O43181 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NDUFS4O43181 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NDUFS4O43181 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.83■□□□□ 0.28
NDUFS4O43181 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NDUFS4O43181 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.83■□□□□ 0.28
NDUFS4O43181 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.83■□□□□ 0.28
NDUFS4O43181 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.83■□□□□ 0.28
NDUFS4O43181 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.83■□□□□ 0.28
NDUFS4O43181 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.83■□□□□ 0.28
NDUFS4O43181 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.83■□□□□ 0.28
NDUFS4O43181 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.83■□□□□ 0.28
NDUFS4O43181 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.83■□□□□ 0.28
NDUFS4O43181 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NDUFS4O43181 AL138688.1-201ENST00000624851 1594 ntBASIC16.83■□□□□ 0.28
NDUFS4O43181 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NDUFS4O43181 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NDUFS4O43181 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.83■□□□□ 0.28
NDUFS4O43181 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.83■□□□□ 0.28
NDUFS4O43181 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
NDUFS4O43181 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NDUFS4O43181 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NDUFS4O43181 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.82■□□□□ 0.28
NDUFS4O43181 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NDUFS4O43181 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.82■□□□□ 0.28
NDUFS4O43181 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NDUFS4O43181 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NDUFS4O43181 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NDUFS4O43181 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NDUFS4O43181 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
NDUFS4O43181 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NDUFS4O43181 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
NDUFS4O43181 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NDUFS4O43181 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NDUFS4O43181 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.82■□□□□ 0.28
NDUFS4O43181 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.82■□□□□ 0.28
NDUFS4O43181 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
NDUFS4O43181 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
NDUFS4O43181 AC103564.2-201ENST00000432853 1299 ntBASIC16.82■□□□□ 0.28
NDUFS4O43181 KRT16P4-201ENST00000453883 522 ntBASIC16.82■□□□□ 0.28
NDUFS4O43181 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.82■□□□□ 0.28
NDUFS4O43181 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.82■□□□□ 0.28
NDUFS4O43181 MIR5100-201ENST00000579544 119 ntBASIC16.82■□□□□ 0.28
NDUFS4O43181 AL591684.3-201ENST00000605187 298 ntBASIC16.82■□□□□ 0.28
NDUFS4O43181 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.82■□□□□ 0.28
NDUFS4O43181 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NDUFS4O43181 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.82■□□□□ 0.28
NDUFS4O43181 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
NDUFS4O43181 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.82■□□□□ 0.28
NDUFS4O43181 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NDUFS4O43181 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.82■□□□□ 0.28
NDUFS4O43181 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NDUFS4O43181 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NDUFS4O43181 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NDUFS4O43181 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NDUFS4O43181 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
NDUFS4O43181 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
NDUFS4O43181 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NDUFS4O43181 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NDUFS4O43181 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NDUFS4O43181 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NDUFS4O43181 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.81■□□□□ 0.28
NDUFS4O43181 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NDUFS4O43181 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
NDUFS4O43181 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.81■□□□□ 0.28
NDUFS4O43181 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.81■□□□□ 0.28
NDUFS4O43181 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
NDUFS4O43181 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.81■□□□□ 0.28
NDUFS4O43181 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.81■□□□□ 0.28
NDUFS4O43181 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NDUFS4O43181 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NDUFS4O43181 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NDUFS4O43181 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.81■□□□□ 0.28
NDUFS4O43181 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.81■□□□□ 0.28
NDUFS4O43181 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.81■□□□□ 0.28
NDUFS4O43181 AC002558.1-201ENST00000488906 803 ntBASIC16.81■□□□□ 0.28
NDUFS4O43181 KRT18P31-201ENST00000506277 1292 ntBASIC16.81■□□□□ 0.28
NDUFS4O43181 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.81■□□□□ 0.28
NDUFS4O43181 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.81■□□□□ 0.28
NDUFS4O43181 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.81■□□□□ 0.28
NDUFS4O43181 AC091304.2-201ENST00000564639 760 ntBASIC16.81■□□□□ 0.28
NDUFS4O43181 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.81■□□□□ 0.28
NDUFS4O43181 AC109462.3-201ENST00000573934 613 ntBASIC16.81■□□□□ 0.28
NDUFS4O43181 AL732292.2-201ENST00000609649 430 ntBASIC16.81■□□□□ 0.28
NDUFS4O43181 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.81■□□□□ 0.28
NDUFS4O43181 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
NDUFS4O43181 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NDUFS4O43181 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.81■□□□□ 0.28
NDUFS4O43181 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NDUFS4O43181 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
NDUFS4O43181 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NDUFS4O43181 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.81■□□□□ 0.28
NDUFS4O43181 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.81■□□□□ 0.28
NDUFS4O43181 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NDUFS4O43181 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
NDUFS4O43181 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
NDUFS4O43181 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NDUFS4O43181 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
NDUFS4O43181 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
NDUFS4O43181 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms