Protein–RNA interactions for Protein: O15537

RS1, Retinoschisin, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RS1O15537 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC12.67□□□□□ -0.38
RS1O15537 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC12.67□□□□□ -0.38
RS1O15537 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC12.67□□□□□ -0.38
RS1O15537 NAA38-203ENST00000575071 553 ntTSL 2 BASIC12.67□□□□□ -0.38
RS1O15537 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RS1O15537 FGF14-AS2-201ENST00000606448 1074 ntBASIC12.67□□□□□ -0.38
RS1O15537 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC12.67□□□□□ -0.38
RS1O15537 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
RS1O15537 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RS1O15537 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC12.67□□□□□ -0.38
RS1O15537 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
RS1O15537 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
RS1O15537 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC12.67□□□□□ -0.38
RS1O15537 CROCCP2-202ENST00000412962 2773 ntBASIC12.67□□□□□ -0.38
RS1O15537 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RS1O15537 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RS1O15537 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RS1O15537 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
RS1O15537 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RS1O15537 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC12.66□□□□□ -0.38
RS1O15537 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RS1O15537 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RS1O15537 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RS1O15537 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
RS1O15537 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RS1O15537 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
RS1O15537 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
RS1O15537 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
RS1O15537 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RS1O15537 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RS1O15537 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RS1O15537 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC12.66□□□□□ -0.38
RS1O15537 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RS1O15537 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
RS1O15537 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RS1O15537 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RS1O15537 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RS1O15537 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RS1O15537 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC12.66□□□□□ -0.38
RS1O15537 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC12.66□□□□□ -0.38
RS1O15537 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RS1O15537 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RS1O15537 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RS1O15537 HBZP1-201ENST00000354915 429 ntBASIC12.66□□□□□ -0.38
RS1O15537 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC12.66□□□□□ -0.38
RS1O15537 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RS1O15537 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RS1O15537 AC005104.2-201ENST00000427818 678 ntBASIC12.66□□□□□ -0.38
RS1O15537 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RS1O15537 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RS1O15537 KRT18P38-201ENST00000449496 1282 ntBASIC12.66□□□□□ -0.38
RS1O15537 AL359075.1-203ENST00000462729 1002 ntBASIC12.66□□□□□ -0.38
RS1O15537 AC068472.1-201ENST00000474589 881 ntBASIC12.66□□□□□ -0.38
RS1O15537 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
RS1O15537 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC12.66□□□□□ -0.38
RS1O15537 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RS1O15537 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RS1O15537 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC12.66□□□□□ -0.38
RS1O15537 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC12.66□□□□□ -0.38
RS1O15537 TK2-213ENST00000563369 882 ntTSL 5 BASIC12.66□□□□□ -0.38
RS1O15537 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RS1O15537 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC12.66□□□□□ -0.38
RS1O15537 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC12.66□□□□□ -0.38
RS1O15537 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC12.66□□□□□ -0.38
RS1O15537 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RS1O15537 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RS1O15537 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC12.66□□□□□ -0.38
RS1O15537 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
RS1O15537 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RS1O15537 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
RS1O15537 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RS1O15537 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
RS1O15537 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RS1O15537 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC12.66□□□□□ -0.38
RS1O15537 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC12.66□□□□□ -0.38
RS1O15537 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RS1O15537 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
RS1O15537 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC12.66□□□□□ -0.38
RS1O15537 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC12.66□□□□□ -0.38
RS1O15537 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
RS1O15537 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RS1O15537 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
RS1O15537 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RS1O15537 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RS1O15537 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC12.65□□□□□ -0.38
RS1O15537 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RS1O15537 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RS1O15537 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
RS1O15537 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RS1O15537 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RS1O15537 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RS1O15537 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC12.65□□□□□ -0.38
RS1O15537 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RS1O15537 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC12.65□□□□□ -0.38
RS1O15537 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RS1O15537 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC12.65□□□□□ -0.38
RS1O15537 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
RS1O15537 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RS1O15537 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
RS1O15537 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms