Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
ABCC4O15439 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
ABCC4O15439 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC22.27■■□□□ 1.16
ABCC4O15439 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
ABCC4O15439 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC22.27■■□□□ 1.16
ABCC4O15439 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
ABCC4O15439 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
ABCC4O15439 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
ABCC4O15439 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
ABCC4O15439 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
ABCC4O15439 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
ABCC4O15439 AC092183.1-201ENST00000469884 875 ntBASIC22.27■■□□□ 1.16
ABCC4O15439 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC22.27■■□□□ 1.16
ABCC4O15439 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC22.27■■□□□ 1.16
ABCC4O15439 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC22.27■■□□□ 1.16
ABCC4O15439 AL139288.1-201ENST00000623748 933 ntBASIC22.27■■□□□ 1.16
ABCC4O15439 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.15
ABCC4O15439 AC139713.2-201ENST00000641328 2723 ntBASIC22.26■■□□□ 1.15
ABCC4O15439 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
ABCC4O15439 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ABCC4O15439 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
ABCC4O15439 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC22.26■■□□□ 1.15
ABCC4O15439 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ABCC4O15439 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC22.26■■□□□ 1.15
ABCC4O15439 FUT8-AS1-201ENST00000621019 1521 ntBASIC22.26■■□□□ 1.15
ABCC4O15439 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC22.26■■□□□ 1.15
ABCC4O15439 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC22.26■■□□□ 1.15
ABCC4O15439 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ABCC4O15439 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
ABCC4O15439 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ABCC4O15439 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
ABCC4O15439 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC22.26■■□□□ 1.15
ABCC4O15439 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC22.26■■□□□ 1.15
ABCC4O15439 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
ABCC4O15439 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
ABCC4O15439 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ABCC4O15439 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ABCC4O15439 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC22.26■■□□□ 1.15
ABCC4O15439 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
ABCC4O15439 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ABCC4O15439 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
ABCC4O15439 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC22.26■■□□□ 1.15
ABCC4O15439 LBH-204ENST00000406087 559 ntTSL 4 BASIC22.26■■□□□ 1.15
ABCC4O15439 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
ABCC4O15439 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC22.26■■□□□ 1.15
ABCC4O15439 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
ABCC4O15439 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ABCC4O15439 AL645608.8-201ENST00000606034 2086 ntBASIC22.26■■□□□ 1.15
ABCC4O15439 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
ABCC4O15439 PMPCAP1-201ENST00000508114 1576 ntBASIC22.26■■□□□ 1.15
ABCC4O15439 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ABCC4O15439 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
ABCC4O15439 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
ABCC4O15439 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC22.25■■□□□ 1.15
ABCC4O15439 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
ABCC4O15439 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
ABCC4O15439 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC22.25■■□□□ 1.15
ABCC4O15439 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC22.25■■□□□ 1.15
ABCC4O15439 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
ABCC4O15439 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC22.25■■□□□ 1.15
ABCC4O15439 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC22.25■■□□□ 1.15
ABCC4O15439 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC22.25■■□□□ 1.15
ABCC4O15439 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC22.25■■□□□ 1.15
ABCC4O15439 AC027601.4-201ENST00000611259 610 ntBASIC22.25■■□□□ 1.15
ABCC4O15439 AP000867.4-201ENST00000641616 219 ntBASIC22.25■■□□□ 1.15
ABCC4O15439 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
ABCC4O15439 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC22.25■■□□□ 1.15
ABCC4O15439 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
ABCC4O15439 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC22.24■■□□□ 1.15
ABCC4O15439 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
ABCC4O15439 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ABCC4O15439 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC22.24■■□□□ 1.15
ABCC4O15439 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC22.24■■□□□ 1.15
ABCC4O15439 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
ABCC4O15439 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
ABCC4O15439 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC22.24■■□□□ 1.15
ABCC4O15439 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
ABCC4O15439 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ABCC4O15439 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC22.24■■□□□ 1.15
ABCC4O15439 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
ABCC4O15439 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
ABCC4O15439 MED15P5-201ENST00000423150 992 ntBASIC22.24■■□□□ 1.15
ABCC4O15439 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC22.24■■□□□ 1.15
ABCC4O15439 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC22.24■■□□□ 1.15
ABCC4O15439 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC22.24■■□□□ 1.15
ABCC4O15439 RNA5SP415-201ENST00000517246 115 ntBASIC22.24■■□□□ 1.15
ABCC4O15439 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC22.24■■□□□ 1.15
ABCC4O15439 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
ABCC4O15439 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC22.24■■□□□ 1.15
ABCC4O15439 NKAPP1-205ENST00000585790 367 ntBASIC22.24■■□□□ 1.15
ABCC4O15439 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC22.24■■□□□ 1.15
ABCC4O15439 AL356488.2-201ENST00000602755 427 ntBASIC22.24■■□□□ 1.15
ABCC4O15439 AC008735.5-201ENST00000623544 497 ntBASIC22.24■■□□□ 1.15
ABCC4O15439 CAND2-206ENST00000626378 333 ntTSL 5 BASIC22.24■■□□□ 1.15
ABCC4O15439 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
ABCC4O15439 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ABCC4O15439 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
ABCC4O15439 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ABCC4O15439 AC141586.5-201ENST00000624546 2050 ntBASIC22.24■■□□□ 1.15
ABCC4O15439 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms