Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.27■□□□□ 0.19
TNFRSF11BO00300 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
TNFRSF11BO00300 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.19
TNFRSF11BO00300 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
TNFRSF11BO00300 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TNFRSF11BO00300 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TNFRSF11BO00300 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TNFRSF11BO00300 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TNFRSF11BO00300 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TNFRSF11BO00300 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TNFRSF11BO00300 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
TNFRSF11BO00300 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16.26■□□□□ 0.19
TNFRSF11BO00300 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TNFRSF11BO00300 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TNFRSF11BO00300 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TNFRSF11BO00300 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.26■□□□□ 0.19
TNFRSF11BO00300 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
TNFRSF11BO00300 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TNFRSF11BO00300 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TNFRSF11BO00300 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.26■□□□□ 0.19
TNFRSF11BO00300 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TNFRSF11BO00300 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TNFRSF11BO00300 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.26■□□□□ 0.19
TNFRSF11BO00300 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.26■□□□□ 0.19
TNFRSF11BO00300 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TNFRSF11BO00300 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.26■□□□□ 0.19
TNFRSF11BO00300 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.26■□□□□ 0.19
TNFRSF11BO00300 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TNFRSF11BO00300 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.26■□□□□ 0.19
TNFRSF11BO00300 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
TNFRSF11BO00300 NEK4P2-201ENST00000580004 1012 ntBASIC16.26■□□□□ 0.19
TNFRSF11BO00300 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.26■□□□□ 0.19
TNFRSF11BO00300 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TNFRSF11BO00300 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TNFRSF11BO00300 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.26■□□□□ 0.19
TNFRSF11BO00300 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
TNFRSF11BO00300 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TNFRSF11BO00300 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TNFRSF11BO00300 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.26■□□□□ 0.19
TNFRSF11BO00300 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TNFRSF11BO00300 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.26■□□□□ 0.19
TNFRSF11BO00300 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TNFRSF11BO00300 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TNFRSF11BO00300 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TNFRSF11BO00300 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.26■□□□□ 0.19
TNFRSF11BO00300 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.26■□□□□ 0.19
TNFRSF11BO00300 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.25■□□□□ 0.19
TNFRSF11BO00300 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF11BO00300 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF11BO00300 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF11BO00300 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF11BO00300 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF11BO00300 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF11BO00300 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF11BO00300 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF11BO00300 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF11BO00300 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF11BO00300 AC116353.5-201ENST00000638148 1699 ntBASIC16.25■□□□□ 0.19
TNFRSF11BO00300 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF11BO00300 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TNFRSF11BO00300 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF11BO00300 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.25■□□□□ 0.19
TNFRSF11BO00300 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
TNFRSF11BO00300 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.25■□□□□ 0.19
TNFRSF11BO00300 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TNFRSF11BO00300 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.25■□□□□ 0.19
TNFRSF11BO00300 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
TNFRSF11BO00300 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.25■□□□□ 0.19
TNFRSF11BO00300 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.25■□□□□ 0.19
TNFRSF11BO00300 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.25■□□□□ 0.19
TNFRSF11BO00300 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.25■□□□□ 0.19
TNFRSF11BO00300 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.25■□□□□ 0.19
TNFRSF11BO00300 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF11BO00300 AC024563.2-201ENST00000603282 481 ntBASIC16.25■□□□□ 0.19
TNFRSF11BO00300 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.25■□□□□ 0.19
TNFRSF11BO00300 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF11BO00300 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF11BO00300 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF11BO00300 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TNFRSF11BO00300 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.25■□□□□ 0.19
TNFRSF11BO00300 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF11BO00300 LINC01311-201ENST00000565162 1445 ntBASIC16.25■□□□□ 0.19
TNFRSF11BO00300 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.25■□□□□ 0.19
TNFRSF11BO00300 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF11BO00300 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TNFRSF11BO00300 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TNFRSF11BO00300 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.25■□□□□ 0.19
TNFRSF11BO00300 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF11BO00300 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.25■□□□□ 0.19
TNFRSF11BO00300 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF11BO00300 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF11BO00300 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
TNFRSF11BO00300 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF11BO00300 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF11BO00300 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF11BO00300 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TNFRSF11BO00300 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TNFRSF11BO00300 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TNFRSF11BO00300 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TNFRSF11BO00300 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms