Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 SYT6-210ENST00000641643 1587 ntBASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 FAM45BP-202ENST00000592932 1624 ntBASIC9.74□□□□□ -0.85
CHKB-CPT1BH3BT56 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
CHKB-CPT1BH3BT56 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC9.74□□□□□ -0.85
CHKB-CPT1BH3BT56 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
CHKB-CPT1BH3BT56 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC9.74□□□□□ -0.85
CHKB-CPT1BH3BT56 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
CHKB-CPT1BH3BT56 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
CHKB-CPT1BH3BT56 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
CHKB-CPT1BH3BT56 KRT8P20-201ENST00000423953 1409 ntBASIC9.74□□□□□ -0.85
CHKB-CPT1BH3BT56 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC9.74□□□□□ -0.85
CHKB-CPT1BH3BT56 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
CHKB-CPT1BH3BT56 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
CHKB-CPT1BH3BT56 AC005224.4-201ENST00000583262 1652 ntBASIC9.74□□□□□ -0.85
CHKB-CPT1BH3BT56 SPTB-203ENST00000389721 6705 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
CHKB-CPT1BH3BT56 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC9.74□□□□□ -0.85
CHKB-CPT1BH3BT56 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC9.74□□□□□ -0.85
CHKB-CPT1BH3BT56 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
CHKB-CPT1BH3BT56 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
CHKB-CPT1BH3BT56 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
CHKB-CPT1BH3BT56 GRIP2-205ENST00000621039 7752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
CHKB-CPT1BH3BT56 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC9.74□□□□□ -0.85
CHKB-CPT1BH3BT56 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
CHKB-CPT1BH3BT56 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
CHKB-CPT1BH3BT56 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC9.74□□□□□ -0.85
CHKB-CPT1BH3BT56 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
CHKB-CPT1BH3BT56 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC9.74□□□□□ -0.85
CHKB-CPT1BH3BT56 LINC00602-201ENST00000629776 2065 ntBASIC9.74□□□□□ -0.85
CHKB-CPT1BH3BT56 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
CHKB-CPT1BH3BT56 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC9.74□□□□□ -0.85
CHKB-CPT1BH3BT56 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
CHKB-CPT1BH3BT56 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
CHKB-CPT1BH3BT56 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
CHKB-CPT1BH3BT56 AR-203ENST00000396044 10221 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
CHKB-CPT1BH3BT56 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC9.74□□□□□ -0.85
CHKB-CPT1BH3BT56 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC9.74□□□□□ -0.85
CHKB-CPT1BH3BT56 ABCA3-201ENST00000301732 6609 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
CHKB-CPT1BH3BT56 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
CHKB-CPT1BH3BT56 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
CHKB-CPT1BH3BT56 KIAA0513-206ENST00000566428 7772 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
CHKB-CPT1BH3BT56 PDE7B-201ENST00000308191 5390 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
CHKB-CPT1BH3BT56 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC9.74□□□□□ -0.85
CHKB-CPT1BH3BT56 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC9.74□□□□□ -0.85
CHKB-CPT1BH3BT56 TNRC18P2-201ENST00000417666 2714 ntBASIC9.74□□□□□ -0.85
CHKB-CPT1BH3BT56 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
CHKB-CPT1BH3BT56 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
CHKB-CPT1BH3BT56 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC9.74□□□□□ -0.85
CHKB-CPT1BH3BT56 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
CHKB-CPT1BH3BT56 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
CHKB-CPT1BH3BT56 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
CHKB-CPT1BH3BT56 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC9.74□□□□□ -0.85
CHKB-CPT1BH3BT56 AC100803.2-201ENST00000562459 1963 ntBASIC9.74□□□□□ -0.85
CHKB-CPT1BH3BT56 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 EPHA5-201ENST00000273854 8266 ntAPPRIS P4 TSL 1 (best) BASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 CEP170-203ENST00000366543 6727 ntTSL 5 BASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 RARRES2P2-201ENST00000394842 485 ntBASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 AC007322.3-201ENST00000426526 701 ntBASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 EEF1DP3-203ENST00000566025 782 ntBASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 AL031963.3-201ENST00000606441 850 ntBASIC9.73□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms