Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC196A0A1B0GTZ2 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC196A0A1B0GTZ2 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC196A0A1B0GTZ2 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC196A0A1B0GTZ2 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC196A0A1B0GTZ2 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC196A0A1B0GTZ2 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC196A0A1B0GTZ2 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC196A0A1B0GTZ2 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC20.42■□□□□ 0.86
CCDC196A0A1B0GTZ2 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC196A0A1B0GTZ2 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC196A0A1B0GTZ2 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CCDC196A0A1B0GTZ2 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC196A0A1B0GTZ2 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CCDC196A0A1B0GTZ2 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC20.42■□□□□ 0.86
CCDC196A0A1B0GTZ2 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.42■□□□□ 0.86
CCDC196A0A1B0GTZ2 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.42■□□□□ 0.86
CCDC196A0A1B0GTZ2 STK25P1-201ENST00000585406 838 ntBASIC20.42■□□□□ 0.86
CCDC196A0A1B0GTZ2 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC196A0A1B0GTZ2 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC196A0A1B0GTZ2 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CCDC196A0A1B0GTZ2 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC196A0A1B0GTZ2 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC196A0A1B0GTZ2 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC196A0A1B0GTZ2 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC196A0A1B0GTZ2 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC196A0A1B0GTZ2 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC196A0A1B0GTZ2 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC196A0A1B0GTZ2 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC196A0A1B0GTZ2 FUT8-AS1-201ENST00000621019 1521 ntBASIC20.42■□□□□ 0.86
CCDC196A0A1B0GTZ2 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC196A0A1B0GTZ2 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
CCDC196A0A1B0GTZ2 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC20.42■□□□□ 0.86
CCDC196A0A1B0GTZ2 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC196A0A1B0GTZ2 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC196A0A1B0GTZ2 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC196A0A1B0GTZ2 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.41■□□□□ 0.86
CCDC196A0A1B0GTZ2 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC196A0A1B0GTZ2 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC196A0A1B0GTZ2 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC196A0A1B0GTZ2 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC196A0A1B0GTZ2 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC196A0A1B0GTZ2 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CCDC196A0A1B0GTZ2 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC196A0A1B0GTZ2 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC196A0A1B0GTZ2 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20.41■□□□□ 0.86
CCDC196A0A1B0GTZ2 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC196A0A1B0GTZ2 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
CCDC196A0A1B0GTZ2 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.41■□□□□ 0.86
CCDC196A0A1B0GTZ2 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.41■□□□□ 0.86
CCDC196A0A1B0GTZ2 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CCDC196A0A1B0GTZ2 PRELID1P1-202ENST00000567272 903 ntBASIC20.41■□□□□ 0.86
CCDC196A0A1B0GTZ2 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.41■□□□□ 0.86
CCDC196A0A1B0GTZ2 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.41■□□□□ 0.86
CCDC196A0A1B0GTZ2 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC196A0A1B0GTZ2 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC196A0A1B0GTZ2 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC196A0A1B0GTZ2 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CCDC196A0A1B0GTZ2 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC196A0A1B0GTZ2 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC196A0A1B0GTZ2 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC196A0A1B0GTZ2 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CCDC196A0A1B0GTZ2 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CCDC196A0A1B0GTZ2 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
CCDC196A0A1B0GTZ2 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CCDC196A0A1B0GTZ2 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC196A0A1B0GTZ2 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC196A0A1B0GTZ2 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CCDC196A0A1B0GTZ2 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC196A0A1B0GTZ2 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC196A0A1B0GTZ2 AC003669.1-201ENST00000334569 611 ntBASIC20.4■□□□□ 0.86
CCDC196A0A1B0GTZ2 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC196A0A1B0GTZ2 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC196A0A1B0GTZ2 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC196A0A1B0GTZ2 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC196A0A1B0GTZ2 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC196A0A1B0GTZ2 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CCDC196A0A1B0GTZ2 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC20.4■□□□□ 0.86
CCDC196A0A1B0GTZ2 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.4■□□□□ 0.86
CCDC196A0A1B0GTZ2 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC196A0A1B0GTZ2 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.4■□□□□ 0.86
CCDC196A0A1B0GTZ2 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC196A0A1B0GTZ2 AC016396.2-201ENST00000562575 1417 ntBASIC20.4■□□□□ 0.86
CCDC196A0A1B0GTZ2 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.4■□□□□ 0.86
CCDC196A0A1B0GTZ2 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.4■□□□□ 0.86
CCDC196A0A1B0GTZ2 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC196A0A1B0GTZ2 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.4■□□□□ 0.86
CCDC196A0A1B0GTZ2 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.4■□□□□ 0.86
CCDC196A0A1B0GTZ2 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CCDC196A0A1B0GTZ2 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20.4■□□□□ 0.86
CCDC196A0A1B0GTZ2 TPR-209ENST00000613151 2478 ntTSL 5 BASIC20.39■□□□□ 0.86
CCDC196A0A1B0GTZ2 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC20.39■□□□□ 0.86
CCDC196A0A1B0GTZ2 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.39■□□□□ 0.86
CCDC196A0A1B0GTZ2 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC196A0A1B0GTZ2 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC196A0A1B0GTZ2 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC196A0A1B0GTZ2 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC20.39■□□□□ 0.86
CCDC196A0A1B0GTZ2 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC196A0A1B0GTZ2 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC196A0A1B0GTZ2 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms