Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV5-4A0A0C4DH59 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV5-4A0A0C4DH59 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TRBV5-4A0A0C4DH59 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV5-4A0A0C4DH59 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TRBV5-4A0A0C4DH59 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV5-4A0A0C4DH59 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV5-4A0A0C4DH59 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV5-4A0A0C4DH59 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV5-4A0A0C4DH59 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.25■□□□□ 0.35
TRBV5-4A0A0C4DH59 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV5-4A0A0C4DH59 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.24■□□□□ 0.35
TRBV5-4A0A0C4DH59 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TRBV5-4A0A0C4DH59 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.24■□□□□ 0.35
TRBV5-4A0A0C4DH59 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV5-4A0A0C4DH59 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
TRBV5-4A0A0C4DH59 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV5-4A0A0C4DH59 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV5-4A0A0C4DH59 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.24■□□□□ 0.35
TRBV5-4A0A0C4DH59 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
TRBV5-4A0A0C4DH59 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.24■□□□□ 0.35
TRBV5-4A0A0C4DH59 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV5-4A0A0C4DH59 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV5-4A0A0C4DH59 AF238378.1-201ENST00000526806 358 ntBASIC17.24■□□□□ 0.35
TRBV5-4A0A0C4DH59 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.24■□□□□ 0.35
TRBV5-4A0A0C4DH59 MTDHP3-201ENST00000594186 672 ntBASIC17.24■□□□□ 0.35
TRBV5-4A0A0C4DH59 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV5-4A0A0C4DH59 AL139288.1-201ENST00000623748 933 ntBASIC17.24■□□□□ 0.35
TRBV5-4A0A0C4DH59 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV5-4A0A0C4DH59 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV5-4A0A0C4DH59 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
TRBV5-4A0A0C4DH59 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV5-4A0A0C4DH59 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.24■□□□□ 0.35
TRBV5-4A0A0C4DH59 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV5-4A0A0C4DH59 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.24■□□□□ 0.35
TRBV5-4A0A0C4DH59 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.24■□□□□ 0.35
TRBV5-4A0A0C4DH59 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV5-4A0A0C4DH59 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.24■□□□□ 0.35
TRBV5-4A0A0C4DH59 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
TRBV5-4A0A0C4DH59 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV5-4A0A0C4DH59 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.23■□□□□ 0.35
TRBV5-4A0A0C4DH59 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.23■□□□□ 0.35
TRBV5-4A0A0C4DH59 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TRBV5-4A0A0C4DH59 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV5-4A0A0C4DH59 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV5-4A0A0C4DH59 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV5-4A0A0C4DH59 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.23■□□□□ 0.35
TRBV5-4A0A0C4DH59 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV5-4A0A0C4DH59 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TRBV5-4A0A0C4DH59 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.23■□□□□ 0.35
TRBV5-4A0A0C4DH59 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV5-4A0A0C4DH59 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV5-4A0A0C4DH59 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
TRBV5-4A0A0C4DH59 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.23■□□□□ 0.35
TRBV5-4A0A0C4DH59 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV5-4A0A0C4DH59 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.23■□□□□ 0.35
TRBV5-4A0A0C4DH59 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.23■□□□□ 0.35
TRBV5-4A0A0C4DH59 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.23■□□□□ 0.35
TRBV5-4A0A0C4DH59 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.23■□□□□ 0.35
TRBV5-4A0A0C4DH59 LINC01711-201ENST00000598340 967 ntBASIC17.23■□□□□ 0.35
TRBV5-4A0A0C4DH59 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TRBV5-4A0A0C4DH59 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV5-4A0A0C4DH59 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV5-4A0A0C4DH59 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV5-4A0A0C4DH59 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
TRBV5-4A0A0C4DH59 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.23■□□□□ 0.35
TRBV5-4A0A0C4DH59 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.23■□□□□ 0.35
TRBV5-4A0A0C4DH59 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV5-4A0A0C4DH59 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV5-4A0A0C4DH59 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV5-4A0A0C4DH59 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.22■□□□□ 0.35
TRBV5-4A0A0C4DH59 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.22■□□□□ 0.35
TRBV5-4A0A0C4DH59 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.22■□□□□ 0.35
TRBV5-4A0A0C4DH59 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV5-4A0A0C4DH59 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV5-4A0A0C4DH59 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV5-4A0A0C4DH59 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.22■□□□□ 0.35
TRBV5-4A0A0C4DH59 AL356309.3-201ENST00000624132 1934 ntBASIC17.22■□□□□ 0.35
TRBV5-4A0A0C4DH59 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV5-4A0A0C4DH59 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV5-4A0A0C4DH59 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV5-4A0A0C4DH59 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV5-4A0A0C4DH59 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.22■□□□□ 0.35
TRBV5-4A0A0C4DH59 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV5-4A0A0C4DH59 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV5-4A0A0C4DH59 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV5-4A0A0C4DH59 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.22■□□□□ 0.35
TRBV5-4A0A0C4DH59 NKAPP1-205ENST00000585790 367 ntBASIC17.22■□□□□ 0.35
TRBV5-4A0A0C4DH59 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.22■□□□□ 0.35
TRBV5-4A0A0C4DH59 AC008608.2-201ENST00000606089 416 ntBASIC17.22■□□□□ 0.35
TRBV5-4A0A0C4DH59 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.22■□□□□ 0.35
TRBV5-4A0A0C4DH59 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.22■□□□□ 0.35
TRBV5-4A0A0C4DH59 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV5-4A0A0C4DH59 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV5-4A0A0C4DH59 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV5-4A0A0C4DH59 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV5-4A0A0C4DH59 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.22■□□□□ 0.35
TRBV5-4A0A0C4DH59 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.21■□□□□ 0.35
TRBV5-4A0A0C4DH59 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV5-4A0A0C4DH59 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms