Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
PTCH2Q9Y6C5 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC19.71■□□□□ 0.75
PTCH2Q9Y6C5 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC19.71■□□□□ 0.75
PTCH2Q9Y6C5 AC022494.1-201ENST00000466044 728 ntBASIC19.71■□□□□ 0.75
PTCH2Q9Y6C5 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PTCH2Q9Y6C5 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PTCH2Q9Y6C5 CR383656.12-201ENST00000549567 513 ntBASIC19.71■□□□□ 0.75
PTCH2Q9Y6C5 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.71■□□□□ 0.75
PTCH2Q9Y6C5 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC19.71■□□□□ 0.75
PTCH2Q9Y6C5 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTCH2Q9Y6C5 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.71■□□□□ 0.75
PTCH2Q9Y6C5 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC19.71■□□□□ 0.75
PTCH2Q9Y6C5 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PTCH2Q9Y6C5 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
PTCH2Q9Y6C5 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PTCH2Q9Y6C5 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTCH2Q9Y6C5 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
PTCH2Q9Y6C5 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTCH2Q9Y6C5 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.7■□□□□ 0.74
PTCH2Q9Y6C5 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
PTCH2Q9Y6C5 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC19.7■□□□□ 0.74
PTCH2Q9Y6C5 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTCH2Q9Y6C5 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PTCH2Q9Y6C5 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTCH2Q9Y6C5 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.7■□□□□ 0.74
PTCH2Q9Y6C5 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC19.7■□□□□ 0.74
PTCH2Q9Y6C5 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PTCH2Q9Y6C5 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC19.7■□□□□ 0.74
PTCH2Q9Y6C5 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.7■□□□□ 0.74
PTCH2Q9Y6C5 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC19.7■□□□□ 0.74
PTCH2Q9Y6C5 AC140878.1-201ENST00000565277 250 ntBASIC19.7■□□□□ 0.74
PTCH2Q9Y6C5 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
PTCH2Q9Y6C5 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC19.7■□□□□ 0.74
PTCH2Q9Y6C5 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.7■□□□□ 0.74
PTCH2Q9Y6C5 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PTCH2Q9Y6C5 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.7■□□□□ 0.74
PTCH2Q9Y6C5 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
PTCH2Q9Y6C5 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PTCH2Q9Y6C5 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.7■□□□□ 0.74
PTCH2Q9Y6C5 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PTCH2Q9Y6C5 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTCH2Q9Y6C5 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTCH2Q9Y6C5 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PTCH2Q9Y6C5 AC009336.1-201ENST00000608941 1553 ntBASIC19.7■□□□□ 0.74
PTCH2Q9Y6C5 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
PTCH2Q9Y6C5 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PTCH2Q9Y6C5 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
PTCH2Q9Y6C5 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PTCH2Q9Y6C5 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.69■□□□□ 0.74
PTCH2Q9Y6C5 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
PTCH2Q9Y6C5 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PTCH2Q9Y6C5 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PTCH2Q9Y6C5 RBPMS2P1-201ENST00000437762 623 ntBASIC19.69■□□□□ 0.74
PTCH2Q9Y6C5 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC19.69■□□□□ 0.74
PTCH2Q9Y6C5 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC19.69■□□□□ 0.74
PTCH2Q9Y6C5 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.69■□□□□ 0.74
PTCH2Q9Y6C5 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.69■□□□□ 0.74
PTCH2Q9Y6C5 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTCH2Q9Y6C5 AL358472.5-202ENST00000641448 1267 ntBASIC19.69■□□□□ 0.74
PTCH2Q9Y6C5 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTCH2Q9Y6C5 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
PTCH2Q9Y6C5 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PTCH2Q9Y6C5 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTCH2Q9Y6C5 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.69■□□□□ 0.74
PTCH2Q9Y6C5 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PTCH2Q9Y6C5 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
PTCH2Q9Y6C5 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTCH2Q9Y6C5 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTCH2Q9Y6C5 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTCH2Q9Y6C5 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.68■□□□□ 0.74
PTCH2Q9Y6C5 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTCH2Q9Y6C5 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PTCH2Q9Y6C5 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PTCH2Q9Y6C5 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTCH2Q9Y6C5 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC19.68■□□□□ 0.74
PTCH2Q9Y6C5 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC19.68■□□□□ 0.74
PTCH2Q9Y6C5 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC19.68■□□□□ 0.74
PTCH2Q9Y6C5 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
PTCH2Q9Y6C5 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PTCH2Q9Y6C5 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC19.68■□□□□ 0.74
PTCH2Q9Y6C5 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PTCH2Q9Y6C5 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PTCH2Q9Y6C5 AC243562.1-201ENST00000560672 389 ntBASIC19.68■□□□□ 0.74
PTCH2Q9Y6C5 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTCH2Q9Y6C5 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PTCH2Q9Y6C5 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PTCH2Q9Y6C5 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTCH2Q9Y6C5 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC19.68■□□□□ 0.74
PTCH2Q9Y6C5 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PTCH2Q9Y6C5 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.68■□□□□ 0.74
PTCH2Q9Y6C5 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTCH2Q9Y6C5 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
PTCH2Q9Y6C5 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTCH2Q9Y6C5 AC093010.1-201ENST00000473625 1624 ntBASIC19.68■□□□□ 0.74
PTCH2Q9Y6C5 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PTCH2Q9Y6C5 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTCH2Q9Y6C5 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.68■□□□□ 0.74
PTCH2Q9Y6C5 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTCH2Q9Y6C5 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.68■□□□□ 0.74
PTCH2Q9Y6C5 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms