Protein–RNA interactions for Protein: Q9Y661

HS3ST4, Heparan sulfate glucosamine 3-O-sulfotransferase 4, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST4Q9Y661 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HS3ST4Q9Y661 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.07■□□□□ 0.48
HS3ST4Q9Y661 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HS3ST4Q9Y661 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
HS3ST4Q9Y661 SCARNA2-201ENST00000458748 420 ntBASIC18.07■□□□□ 0.48
HS3ST4Q9Y661 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
HS3ST4Q9Y661 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
HS3ST4Q9Y661 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.07■□□□□ 0.48
HS3ST4Q9Y661 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.07■□□□□ 0.48
HS3ST4Q9Y661 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.07■□□□□ 0.48
HS3ST4Q9Y661 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.07■□□□□ 0.48
HS3ST4Q9Y661 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HS3ST4Q9Y661 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.07■□□□□ 0.48
HS3ST4Q9Y661 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.07■□□□□ 0.48
HS3ST4Q9Y661 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HS3ST4Q9Y661 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
HS3ST4Q9Y661 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
HS3ST4Q9Y661 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HS3ST4Q9Y661 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
HS3ST4Q9Y661 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HS3ST4Q9Y661 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HS3ST4Q9Y661 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HS3ST4Q9Y661 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HS3ST4Q9Y661 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HS3ST4Q9Y661 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
HS3ST4Q9Y661 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HS3ST4Q9Y661 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
HS3ST4Q9Y661 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.06■□□□□ 0.48
HS3ST4Q9Y661 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.06■□□□□ 0.48
HS3ST4Q9Y661 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.06■□□□□ 0.48
HS3ST4Q9Y661 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.06■□□□□ 0.48
HS3ST4Q9Y661 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HS3ST4Q9Y661 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HS3ST4Q9Y661 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.06■□□□□ 0.48
HS3ST4Q9Y661 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
HS3ST4Q9Y661 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
HS3ST4Q9Y661 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.06■□□□□ 0.48
HS3ST4Q9Y661 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.06■□□□□ 0.48
HS3ST4Q9Y661 FAM197Y8-203ENST00000450145 560 ntBASIC18.06■□□□□ 0.48
HS3ST4Q9Y661 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.06■□□□□ 0.48
HS3ST4Q9Y661 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.06■□□□□ 0.48
HS3ST4Q9Y661 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.06■□□□□ 0.48
HS3ST4Q9Y661 LINC00896-202ENST00000609602 2128 ntBASIC18.06■□□□□ 0.48
HS3ST4Q9Y661 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.06■□□□□ 0.48
HS3ST4Q9Y661 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HS3ST4Q9Y661 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HS3ST4Q9Y661 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.06■□□□□ 0.48
HS3ST4Q9Y661 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.06■□□□□ 0.48
HS3ST4Q9Y661 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HS3ST4Q9Y661 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
HS3ST4Q9Y661 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HS3ST4Q9Y661 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HS3ST4Q9Y661 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.06■□□□□ 0.48
HS3ST4Q9Y661 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HS3ST4Q9Y661 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HS3ST4Q9Y661 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
HS3ST4Q9Y661 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HS3ST4Q9Y661 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HS3ST4Q9Y661 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HS3ST4Q9Y661 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HS3ST4Q9Y661 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HS3ST4Q9Y661 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
HS3ST4Q9Y661 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HS3ST4Q9Y661 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HS3ST4Q9Y661 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HS3ST4Q9Y661 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
HS3ST4Q9Y661 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HS3ST4Q9Y661 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HS3ST4Q9Y661 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
HS3ST4Q9Y661 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.05■□□□□ 0.48
HS3ST4Q9Y661 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HS3ST4Q9Y661 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HS3ST4Q9Y661 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.05■□□□□ 0.48
HS3ST4Q9Y661 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HS3ST4Q9Y661 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HS3ST4Q9Y661 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.05■□□□□ 0.48
HS3ST4Q9Y661 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
HS3ST4Q9Y661 AC009078.2-202ENST00000463353 338 ntBASIC18.05■□□□□ 0.48
HS3ST4Q9Y661 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.05■□□□□ 0.48
HS3ST4Q9Y661 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HS3ST4Q9Y661 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
HS3ST4Q9Y661 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.05■□□□□ 0.48
HS3ST4Q9Y661 AC021087.4-201ENST00000563761 564 ntBASIC18.05■□□□□ 0.48
HS3ST4Q9Y661 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
HS3ST4Q9Y661 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.05■□□□□ 0.48
HS3ST4Q9Y661 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HS3ST4Q9Y661 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HS3ST4Q9Y661 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
HS3ST4Q9Y661 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
HS3ST4Q9Y661 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HS3ST4Q9Y661 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HS3ST4Q9Y661 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HS3ST4Q9Y661 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
HS3ST4Q9Y661 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.04■□□□□ 0.48
HS3ST4Q9Y661 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HS3ST4Q9Y661 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HS3ST4Q9Y661 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HS3ST4Q9Y661 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
HS3ST4Q9Y661 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
HS3ST4Q9Y661 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms