Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAPPC1Q9Y5R8 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAPPC1Q9Y5R8 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC13.34□□□□□ -0.27
TRAPPC1Q9Y5R8 PLLP-204ENST00000569059 665 ntTSL 3 BASIC13.34□□□□□ -0.27
TRAPPC1Q9Y5R8 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC13.34□□□□□ -0.27
TRAPPC1Q9Y5R8 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAPPC1Q9Y5R8 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
TRAPPC1Q9Y5R8 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
TRAPPC1Q9Y5R8 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAPPC1Q9Y5R8 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAPPC1Q9Y5R8 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAPPC1Q9Y5R8 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
TRAPPC1Q9Y5R8 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAPPC1Q9Y5R8 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC13.34□□□□□ -0.27
TRAPPC1Q9Y5R8 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
TRAPPC1Q9Y5R8 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
TRAPPC1Q9Y5R8 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAPPC1Q9Y5R8 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.34□□□□□ -0.27
TRAPPC1Q9Y5R8 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAPPC1Q9Y5R8 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAPPC1Q9Y5R8 RCC2P3-201ENST00000418112 1537 ntBASIC13.34□□□□□ -0.27
TRAPPC1Q9Y5R8 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
TRAPPC1Q9Y5R8 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC13.33□□□□□ -0.27
TRAPPC1Q9Y5R8 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC13.33□□□□□ -0.27
TRAPPC1Q9Y5R8 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
TRAPPC1Q9Y5R8 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TRAPPC1Q9Y5R8 AL365203.3-201ENST00000609742 2057 ntBASIC13.33□□□□□ -0.27
TRAPPC1Q9Y5R8 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAPPC1Q9Y5R8 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAPPC1Q9Y5R8 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAPPC1Q9Y5R8 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAPPC1Q9Y5R8 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
TRAPPC1Q9Y5R8 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAPPC1Q9Y5R8 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAPPC1Q9Y5R8 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAPPC1Q9Y5R8 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAPPC1Q9Y5R8 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAPPC1Q9Y5R8 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAPPC1Q9Y5R8 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAPPC1Q9Y5R8 AL136116.3-201ENST00000402907 1138 ntBASIC13.33□□□□□ -0.28
TRAPPC1Q9Y5R8 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
TRAPPC1Q9Y5R8 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAPPC1Q9Y5R8 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC13.33□□□□□ -0.28
TRAPPC1Q9Y5R8 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAPPC1Q9Y5R8 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
TRAPPC1Q9Y5R8 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAPPC1Q9Y5R8 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC13.33□□□□□ -0.28
TRAPPC1Q9Y5R8 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAPPC1Q9Y5R8 AC116353.5-201ENST00000638148 1699 ntBASIC13.33□□□□□ -0.28
TRAPPC1Q9Y5R8 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC13.33□□□□□ -0.28
TRAPPC1Q9Y5R8 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAPPC1Q9Y5R8 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAPPC1Q9Y5R8 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
TRAPPC1Q9Y5R8 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
TRAPPC1Q9Y5R8 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAPPC1Q9Y5R8 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAPPC1Q9Y5R8 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAPPC1Q9Y5R8 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAPPC1Q9Y5R8 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAPPC1Q9Y5R8 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
TRAPPC1Q9Y5R8 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAPPC1Q9Y5R8 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
TRAPPC1Q9Y5R8 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
TRAPPC1Q9Y5R8 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
TRAPPC1Q9Y5R8 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAPPC1Q9Y5R8 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
TRAPPC1Q9Y5R8 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAPPC1Q9Y5R8 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAPPC1Q9Y5R8 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
TRAPPC1Q9Y5R8 AC126177.1-201ENST00000547829 2218 ntBASIC13.32□□□□□ -0.28
TRAPPC1Q9Y5R8 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAPPC1Q9Y5R8 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
TRAPPC1Q9Y5R8 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAPPC1Q9Y5R8 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
TRAPPC1Q9Y5R8 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
TRAPPC1Q9Y5R8 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAPPC1Q9Y5R8 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAPPC1Q9Y5R8 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAPPC1Q9Y5R8 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAPPC1Q9Y5R8 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAPPC1Q9Y5R8 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAPPC1Q9Y5R8 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAPPC1Q9Y5R8 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAPPC1Q9Y5R8 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.32□□□□□ -0.28
TRAPPC1Q9Y5R8 GPX1P1-201ENST00000388829 606 ntBASIC13.32□□□□□ -0.28
TRAPPC1Q9Y5R8 GUSBP5-201ENST00000418136 578 ntBASIC13.32□□□□□ -0.28
TRAPPC1Q9Y5R8 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
TRAPPC1Q9Y5R8 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC13.32□□□□□ -0.28
TRAPPC1Q9Y5R8 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
TRAPPC1Q9Y5R8 BRI3-207ENST00000539286 699 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAPPC1Q9Y5R8 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC13.32□□□□□ -0.28
TRAPPC1Q9Y5R8 GALNS-213ENST00000569433 723 ntTSL 3 BASIC13.32□□□□□ -0.28
TRAPPC1Q9Y5R8 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC13.32□□□□□ -0.28
TRAPPC1Q9Y5R8 AL121906.2-201ENST00000621597 723 ntBASIC13.32□□□□□ -0.28
TRAPPC1Q9Y5R8 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAPPC1Q9Y5R8 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAPPC1Q9Y5R8 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
TRAPPC1Q9Y5R8 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAPPC1Q9Y5R8 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAPPC1Q9Y5R8 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms