Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHGA1Q9Y5H4 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.84■□□□□ 0.29
PCDHGA1Q9Y5H4 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA1Q9Y5H4 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.84■□□□□ 0.29
PCDHGA1Q9Y5H4 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHGA1Q9Y5H4 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.84■□□□□ 0.29
PCDHGA1Q9Y5H4 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.84■□□□□ 0.29
PCDHGA1Q9Y5H4 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.84■□□□□ 0.29
PCDHGA1Q9Y5H4 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.84■□□□□ 0.29
PCDHGA1Q9Y5H4 AC019129.2-201ENST00000609837 1235 ntBASIC16.84■□□□□ 0.29
PCDHGA1Q9Y5H4 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA1Q9Y5H4 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA1Q9Y5H4 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA1Q9Y5H4 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
PCDHGA1Q9Y5H4 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHGA1Q9Y5H4 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PCDHGA1Q9Y5H4 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA1Q9Y5H4 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA1Q9Y5H4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PCDHGA1Q9Y5H4 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
PCDHGA1Q9Y5H4 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
PCDHGA1Q9Y5H4 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
PCDHGA1Q9Y5H4 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PCDHGA1Q9Y5H4 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.29
PCDHGA1Q9Y5H4 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA1Q9Y5H4 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA1Q9Y5H4 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA1Q9Y5H4 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA1Q9Y5H4 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA1Q9Y5H4 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA1Q9Y5H4 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA1Q9Y5H4 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
PCDHGA1Q9Y5H4 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA1Q9Y5H4 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA1Q9Y5H4 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.83■□□□□ 0.28
PCDHGA1Q9Y5H4 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
PCDHGA1Q9Y5H4 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.83■□□□□ 0.28
PCDHGA1Q9Y5H4 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA1Q9Y5H4 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDHGA1Q9Y5H4 TNXA-203ENST00000507684 2038 ntBASIC16.83■□□□□ 0.28
PCDHGA1Q9Y5H4 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.83■□□□□ 0.28
PCDHGA1Q9Y5H4 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDHGA1Q9Y5H4 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDHGA1Q9Y5H4 AC004449.1-201ENST00000564240 433 ntBASIC16.83■□□□□ 0.28
PCDHGA1Q9Y5H4 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.83■□□□□ 0.28
PCDHGA1Q9Y5H4 STK25P1-201ENST00000585406 838 ntBASIC16.83■□□□□ 0.28
PCDHGA1Q9Y5H4 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA1Q9Y5H4 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA1Q9Y5H4 AL353135.1-201ENST00000606729 504 ntBASIC16.83■□□□□ 0.28
PCDHGA1Q9Y5H4 AC025580.3-201ENST00000617932 1424 ntBASIC16.83■□□□□ 0.28
PCDHGA1Q9Y5H4 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA1Q9Y5H4 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA1Q9Y5H4 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA1Q9Y5H4 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.82■□□□□ 0.28
PCDHGA1Q9Y5H4 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PCDHGA1Q9Y5H4 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA1Q9Y5H4 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.82■□□□□ 0.28
PCDHGA1Q9Y5H4 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGA1Q9Y5H4 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGA1Q9Y5H4 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA1Q9Y5H4 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PCDHGA1Q9Y5H4 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA1Q9Y5H4 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGA1Q9Y5H4 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.82■□□□□ 0.28
PCDHGA1Q9Y5H4 AL139400.1-201ENST00000366220 510 ntBASIC16.82■□□□□ 0.28
PCDHGA1Q9Y5H4 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA1Q9Y5H4 BCRP1-201ENST00000444246 691 ntBASIC16.82■□□□□ 0.28
PCDHGA1Q9Y5H4 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PCDHGA1Q9Y5H4 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.82■□□□□ 0.28
PCDHGA1Q9Y5H4 COX20P2-201ENST00000452636 358 ntBASIC16.82■□□□□ 0.28
PCDHGA1Q9Y5H4 HLA-J-203ENST00000494367 1087 ntBASIC16.82■□□□□ 0.28
PCDHGA1Q9Y5H4 STK19B-204ENST00000512515 211 ntBASIC16.82■□□□□ 0.28
PCDHGA1Q9Y5H4 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PCDHGA1Q9Y5H4 AC025678.2-201ENST00000562061 970 ntBASIC16.82■□□□□ 0.28
PCDHGA1Q9Y5H4 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.82■□□□□ 0.28
PCDHGA1Q9Y5H4 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.82■□□□□ 0.28
PCDHGA1Q9Y5H4 OR7E47P-204ENST00000575924 449 ntBASIC16.82■□□□□ 0.28
PCDHGA1Q9Y5H4 AC091812.2-201ENST00000619081 385 ntBASIC16.82■□□□□ 0.28
PCDHGA1Q9Y5H4 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA1Q9Y5H4 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGA1Q9Y5H4 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA1Q9Y5H4 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGA1Q9Y5H4 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA1Q9Y5H4 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PCDHGA1Q9Y5H4 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA1Q9Y5H4 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGA1Q9Y5H4 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA1Q9Y5H4 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA1Q9Y5H4 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA1Q9Y5H4 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA1Q9Y5H4 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHGA1Q9Y5H4 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHGA1Q9Y5H4 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA1Q9Y5H4 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PCDHGA1Q9Y5H4 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA1Q9Y5H4 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA1Q9Y5H4 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PCDHGA1Q9Y5H4 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
PCDHGA1Q9Y5H4 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA1Q9Y5H4 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms