Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
NINLQ9Y2I6 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
NINLQ9Y2I6 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC23.92■■□□□ 1.42
NINLQ9Y2I6 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC23.92■■□□□ 1.42
NINLQ9Y2I6 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC23.92■■□□□ 1.42
NINLQ9Y2I6 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC23.92■■□□□ 1.42
NINLQ9Y2I6 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
NINLQ9Y2I6 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
NINLQ9Y2I6 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
NINLQ9Y2I6 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
NINLQ9Y2I6 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC23.91■■□□□ 1.42
NINLQ9Y2I6 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC23.91■■□□□ 1.42
NINLQ9Y2I6 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
NINLQ9Y2I6 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC23.91■■□□□ 1.42
NINLQ9Y2I6 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
NINLQ9Y2I6 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
NINLQ9Y2I6 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC23.91■■□□□ 1.42
NINLQ9Y2I6 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC23.91■■□□□ 1.42
NINLQ9Y2I6 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC23.91■■□□□ 1.42
NINLQ9Y2I6 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC23.91■■□□□ 1.42
NINLQ9Y2I6 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
NINLQ9Y2I6 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
NINLQ9Y2I6 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC23.91■■□□□ 1.42
NINLQ9Y2I6 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
NINLQ9Y2I6 AL135999.2-201ENST00000622438 1686 ntBASIC23.91■■□□□ 1.42
NINLQ9Y2I6 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC23.91■■□□□ 1.42
NINLQ9Y2I6 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC23.91■■□□□ 1.42
NINLQ9Y2I6 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
NINLQ9Y2I6 ATP6V0CP3-201ENST00000417255 467 ntBASIC23.91■■□□□ 1.42
NINLQ9Y2I6 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC23.91■■□□□ 1.42
NINLQ9Y2I6 HCG4B-203ENST00000450128 991 ntBASIC23.91■■□□□ 1.42
NINLQ9Y2I6 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC23.91■■□□□ 1.42
NINLQ9Y2I6 AC002347.1-201ENST00000569543 541 ntBASIC23.91■■□□□ 1.42
NINLQ9Y2I6 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
NINLQ9Y2I6 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC23.91■■□□□ 1.42
NINLQ9Y2I6 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
NINLQ9Y2I6 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
NINLQ9Y2I6 AL590787.1-201ENST00000568856 1315 ntBASIC23.9■■□□□ 1.42
NINLQ9Y2I6 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC23.9■■□□□ 1.42
NINLQ9Y2I6 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
NINLQ9Y2I6 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
NINLQ9Y2I6 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC23.9■■□□□ 1.42
NINLQ9Y2I6 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC23.9■■□□□ 1.42
NINLQ9Y2I6 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC23.9■■□□□ 1.42
NINLQ9Y2I6 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
NINLQ9Y2I6 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC23.9■■□□□ 1.42
NINLQ9Y2I6 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
NINLQ9Y2I6 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
NINLQ9Y2I6 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
NINLQ9Y2I6 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC23.9■■□□□ 1.42
NINLQ9Y2I6 AL035633.1-201ENST00000406139 838 ntBASIC23.9■■□□□ 1.42
NINLQ9Y2I6 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC23.9■■□□□ 1.42
NINLQ9Y2I6 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC23.9■■□□□ 1.42
NINLQ9Y2I6 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC23.9■■□□□ 1.42
NINLQ9Y2I6 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC23.9■■□□□ 1.42
NINLQ9Y2I6 GGTLC5P-201ENST00000617623 998 ntBASIC23.9■■□□□ 1.42
NINLQ9Y2I6 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC23.9■■□□□ 1.42
NINLQ9Y2I6 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC23.89■■□□□ 1.42
NINLQ9Y2I6 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
NINLQ9Y2I6 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC23.89■■□□□ 1.42
NINLQ9Y2I6 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
NINLQ9Y2I6 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.42
NINLQ9Y2I6 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC23.89■■□□□ 1.42
NINLQ9Y2I6 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
NINLQ9Y2I6 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC23.89■■□□□ 1.42
NINLQ9Y2I6 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC23.89■■□□□ 1.42
NINLQ9Y2I6 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC23.89■■□□□ 1.42
NINLQ9Y2I6 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC23.89■■□□□ 1.42
NINLQ9Y2I6 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC23.89■■□□□ 1.42
NINLQ9Y2I6 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.42
NINLQ9Y2I6 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.42
NINLQ9Y2I6 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
NINLQ9Y2I6 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
NINLQ9Y2I6 NOC2LP1-202ENST00000452600 2235 ntBASIC23.89■■□□□ 1.41
NINLQ9Y2I6 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
NINLQ9Y2I6 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
NINLQ9Y2I6 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC23.89■■□□□ 1.41
NINLQ9Y2I6 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC23.89■■□□□ 1.41
NINLQ9Y2I6 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
NINLQ9Y2I6 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC23.89■■□□□ 1.41
NINLQ9Y2I6 WBP2-203ENST00000433525 928 ntTSL 2 BASIC23.89■■□□□ 1.41
NINLQ9Y2I6 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC23.89■■□□□ 1.41
NINLQ9Y2I6 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
NINLQ9Y2I6 MIR4751-201ENST00000578027 74 ntBASIC23.89■■□□□ 1.41
NINLQ9Y2I6 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC23.89■■□□□ 1.41
NINLQ9Y2I6 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC23.89■■□□□ 1.41
NINLQ9Y2I6 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC23.89■■□□□ 1.41
NINLQ9Y2I6 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC23.89■■□□□ 1.41
NINLQ9Y2I6 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
NINLQ9Y2I6 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
NINLQ9Y2I6 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC23.89■■□□□ 1.41
NINLQ9Y2I6 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
NINLQ9Y2I6 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
NINLQ9Y2I6 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC23.88■■□□□ 1.41
NINLQ9Y2I6 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC23.88■■□□□ 1.41
NINLQ9Y2I6 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
NINLQ9Y2I6 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
NINLQ9Y2I6 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
NINLQ9Y2I6 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
NINLQ9Y2I6 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms