Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGB4Q9UN71 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHGB4Q9UN71 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGB4Q9UN71 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGB4Q9UN71 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PCDHGB4Q9UN71 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB4Q9UN71 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDHGB4Q9UN71 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB4Q9UN71 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
PCDHGB4Q9UN71 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB4Q9UN71 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB4Q9UN71 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB4Q9UN71 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHGB4Q9UN71 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB4Q9UN71 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB4Q9UN71 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB4Q9UN71 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB4Q9UN71 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDHGB4Q9UN71 INGX-201ENST00000359239 846 ntBASIC17.09■□□□□ 0.33
PCDHGB4Q9UN71 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB4Q9UN71 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PCDHGB4Q9UN71 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PCDHGB4Q9UN71 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB4Q9UN71 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB4Q9UN71 DUTP2-201ENST00000519164 463 ntBASIC17.09■□□□□ 0.33
PCDHGB4Q9UN71 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHGB4Q9UN71 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.09■□□□□ 0.33
PCDHGB4Q9UN71 AC010947.1-201ENST00000623454 693 ntBASIC17.09■□□□□ 0.33
PCDHGB4Q9UN71 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDHGB4Q9UN71 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB4Q9UN71 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB4Q9UN71 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB4Q9UN71 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
PCDHGB4Q9UN71 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PCDHGB4Q9UN71 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB4Q9UN71 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB4Q9UN71 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB4Q9UN71 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDHGB4Q9UN71 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB4Q9UN71 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
PCDHGB4Q9UN71 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB4Q9UN71 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB4Q9UN71 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGB4Q9UN71 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHGB4Q9UN71 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHGB4Q9UN71 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.08■□□□□ 0.33
PCDHGB4Q9UN71 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
PCDHGB4Q9UN71 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.08■□□□□ 0.33
PCDHGB4Q9UN71 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHGB4Q9UN71 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHGB4Q9UN71 AGGF1P2-201ENST00000426656 2106 ntBASIC17.08■□□□□ 0.33
PCDHGB4Q9UN71 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
PCDHGB4Q9UN71 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
PCDHGB4Q9UN71 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHGB4Q9UN71 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.08■□□□□ 0.33
PCDHGB4Q9UN71 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB4Q9UN71 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB4Q9UN71 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB4Q9UN71 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
PCDHGB4Q9UN71 AL121761.2-201ENST00000598007 1648 ntBASIC17.08■□□□□ 0.32
PCDHGB4Q9UN71 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB4Q9UN71 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB4Q9UN71 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB4Q9UN71 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB4Q9UN71 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDHGB4Q9UN71 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB4Q9UN71 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB4Q9UN71 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDHGB4Q9UN71 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB4Q9UN71 ECEL1P2-202ENST00000465689 757 ntBASIC17.08■□□□□ 0.32
PCDHGB4Q9UN71 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.08■□□□□ 0.32
PCDHGB4Q9UN71 AC093827.2-201ENST00000512654 315 ntBASIC17.08■□□□□ 0.32
PCDHGB4Q9UN71 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.08■□□□□ 0.32
PCDHGB4Q9UN71 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB4Q9UN71 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDHGB4Q9UN71 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.08■□□□□ 0.32
PCDHGB4Q9UN71 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDHGB4Q9UN71 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB4Q9UN71 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB4Q9UN71 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB4Q9UN71 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.08■□□□□ 0.32
PCDHGB4Q9UN71 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDHGB4Q9UN71 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB4Q9UN71 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB4Q9UN71 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PCDHGB4Q9UN71 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDHGB4Q9UN71 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB4Q9UN71 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB4Q9UN71 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB4Q9UN71 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB4Q9UN71 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHGB4Q9UN71 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB4Q9UN71 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PCDHGB4Q9UN71 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB4Q9UN71 FLJ38576-201ENST00000623820 2459 ntBASIC17.07■□□□□ 0.32
PCDHGB4Q9UN71 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHGB4Q9UN71 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB4Q9UN71 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB4Q9UN71 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB4Q9UN71 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms