Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EBF1Q9UH73 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EBF1Q9UH73 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EBF1Q9UH73 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
EBF1Q9UH73 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EBF1Q9UH73 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
EBF1Q9UH73 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
EBF1Q9UH73 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EBF1Q9UH73 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.89■□□□□ 0.45
EBF1Q9UH73 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
EBF1Q9UH73 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.89■□□□□ 0.45
EBF1Q9UH73 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.89■□□□□ 0.45
EBF1Q9UH73 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.89■□□□□ 0.45
EBF1Q9UH73 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.89■□□□□ 0.45
EBF1Q9UH73 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.89■□□□□ 0.45
EBF1Q9UH73 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
EBF1Q9UH73 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.89■□□□□ 0.45
EBF1Q9UH73 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EBF1Q9UH73 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
EBF1Q9UH73 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.89■□□□□ 0.45
EBF1Q9UH73 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.89■□□□□ 0.45
EBF1Q9UH73 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
EBF1Q9UH73 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
EBF1Q9UH73 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.89■□□□□ 0.45
EBF1Q9UH73 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
EBF1Q9UH73 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.89■□□□□ 0.45
EBF1Q9UH73 SIGLEC16-201ENST00000599858 1437 ntBASIC17.89■□□□□ 0.45
EBF1Q9UH73 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
EBF1Q9UH73 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.88■□□□□ 0.45
EBF1Q9UH73 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.88■□□□□ 0.45
EBF1Q9UH73 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
EBF1Q9UH73 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.88■□□□□ 0.45
EBF1Q9UH73 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
EBF1Q9UH73 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
EBF1Q9UH73 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
EBF1Q9UH73 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
EBF1Q9UH73 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EBF1Q9UH73 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EBF1Q9UH73 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
EBF1Q9UH73 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
EBF1Q9UH73 AC073621.1-201ENST00000392730 636 ntBASIC17.88■□□□□ 0.45
EBF1Q9UH73 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.88■□□□□ 0.45
EBF1Q9UH73 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.88■□□□□ 0.45
EBF1Q9UH73 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.88■□□□□ 0.45
EBF1Q9UH73 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.88■□□□□ 0.45
EBF1Q9UH73 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.88■□□□□ 0.45
EBF1Q9UH73 BX005266.1-201ENST00000473402 457 ntBASIC17.88■□□□□ 0.45
EBF1Q9UH73 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
EBF1Q9UH73 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
EBF1Q9UH73 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.88■□□□□ 0.45
EBF1Q9UH73 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EBF1Q9UH73 AD001527.2-201ENST00000622994 785 ntBASIC17.88■□□□□ 0.45
EBF1Q9UH73 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
EBF1Q9UH73 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.88■□□□□ 0.45
EBF1Q9UH73 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EBF1Q9UH73 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EBF1Q9UH73 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EBF1Q9UH73 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.88■□□□□ 0.45
EBF1Q9UH73 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.88■□□□□ 0.45
EBF1Q9UH73 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.88■□□□□ 0.45
EBF1Q9UH73 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.87■□□□□ 0.45
EBF1Q9UH73 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
EBF1Q9UH73 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
EBF1Q9UH73 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
EBF1Q9UH73 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
EBF1Q9UH73 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
EBF1Q9UH73 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
EBF1Q9UH73 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.87■□□□□ 0.45
EBF1Q9UH73 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
EBF1Q9UH73 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
EBF1Q9UH73 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
EBF1Q9UH73 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.87■□□□□ 0.45
EBF1Q9UH73 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
EBF1Q9UH73 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
EBF1Q9UH73 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
EBF1Q9UH73 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
EBF1Q9UH73 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
EBF1Q9UH73 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.87■□□□□ 0.45
EBF1Q9UH73 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
EBF1Q9UH73 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
EBF1Q9UH73 AC023274.1-201ENST00000418278 595 ntBASIC17.87■□□□□ 0.45
EBF1Q9UH73 AP006288.1-201ENST00000446065 395 ntBASIC17.87■□□□□ 0.45
EBF1Q9UH73 DNAJB3-202ENST00000449667 1266 ntBASIC17.87■□□□□ 0.45
EBF1Q9UH73 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.87■□□□□ 0.45
EBF1Q9UH73 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.87■□□□□ 0.45
EBF1Q9UH73 AC064836.3-201ENST00000607928 673 ntBASIC17.87■□□□□ 0.45
EBF1Q9UH73 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
EBF1Q9UH73 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
EBF1Q9UH73 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
EBF1Q9UH73 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.87■□□□□ 0.45
EBF1Q9UH73 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
EBF1Q9UH73 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
EBF1Q9UH73 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
EBF1Q9UH73 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.87■□□□□ 0.45
EBF1Q9UH73 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.87■□□□□ 0.45
EBF1Q9UH73 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
EBF1Q9UH73 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
EBF1Q9UH73 AC010460.3-201ENST00000511359 1579 ntBASIC17.87■□□□□ 0.45
EBF1Q9UH73 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
EBF1Q9UH73 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms