Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CTSFQ9UBX1 AC148477.5-201ENST00000625164 1645 ntBASIC16.55■□□□□ 0.24
CTSFQ9UBX1 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTSFQ9UBX1 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTSFQ9UBX1 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTSFQ9UBX1 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CTSFQ9UBX1 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTSFQ9UBX1 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CTSFQ9UBX1 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CTSFQ9UBX1 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
CTSFQ9UBX1 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTSFQ9UBX1 SIGLEC16-201ENST00000599858 1437 ntBASIC16.54■□□□□ 0.24
CTSFQ9UBX1 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CTSFQ9UBX1 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.54■□□□□ 0.24
CTSFQ9UBX1 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTSFQ9UBX1 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTSFQ9UBX1 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CTSFQ9UBX1 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.54■□□□□ 0.24
CTSFQ9UBX1 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CTSFQ9UBX1 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTSFQ9UBX1 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CTSFQ9UBX1 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.54■□□□□ 0.24
CTSFQ9UBX1 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CTSFQ9UBX1 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
CTSFQ9UBX1 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.54■□□□□ 0.24
CTSFQ9UBX1 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.54■□□□□ 0.24
CTSFQ9UBX1 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.54■□□□□ 0.24
CTSFQ9UBX1 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.54■□□□□ 0.24
CTSFQ9UBX1 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.54■□□□□ 0.24
CTSFQ9UBX1 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTSFQ9UBX1 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.54■□□□□ 0.24
CTSFQ9UBX1 AC116407.3-201ENST00000623905 1129 ntBASIC16.54■□□□□ 0.24
CTSFQ9UBX1 AC107918.4-202ENST00000641623 219 ntBASIC16.54■□□□□ 0.24
CTSFQ9UBX1 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTSFQ9UBX1 HLA-J-201ENST00000462773 1622 ntBASIC16.54■□□□□ 0.24
CTSFQ9UBX1 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTSFQ9UBX1 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.54■□□□□ 0.24
CTSFQ9UBX1 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTSFQ9UBX1 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.54■□□□□ 0.24
CTSFQ9UBX1 AC106820.2-201ENST00000563775 3264 ntBASIC16.54■□□□□ 0.24
CTSFQ9UBX1 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.54■□□□□ 0.24
CTSFQ9UBX1 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CTSFQ9UBX1 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.54■□□□□ 0.24
CTSFQ9UBX1 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CTSFQ9UBX1 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.54■□□□□ 0.24
CTSFQ9UBX1 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CTSFQ9UBX1 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTSFQ9UBX1 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.53■□□□□ 0.24
CTSFQ9UBX1 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTSFQ9UBX1 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTSFQ9UBX1 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CTSFQ9UBX1 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTSFQ9UBX1 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
CTSFQ9UBX1 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CTSFQ9UBX1 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.53■□□□□ 0.24
CTSFQ9UBX1 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTSFQ9UBX1 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTSFQ9UBX1 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.53■□□□□ 0.24
CTSFQ9UBX1 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.53■□□□□ 0.24
CTSFQ9UBX1 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.53■□□□□ 0.24
CTSFQ9UBX1 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.53■□□□□ 0.24
CTSFQ9UBX1 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.53■□□□□ 0.24
CTSFQ9UBX1 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.53■□□□□ 0.24
CTSFQ9UBX1 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTSFQ9UBX1 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.53■□□□□ 0.24
CTSFQ9UBX1 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.53■□□□□ 0.24
CTSFQ9UBX1 AC008735.5-201ENST00000623544 497 ntBASIC16.53■□□□□ 0.24
CTSFQ9UBX1 AF228730.7-201ENST00000641842 219 ntBASIC16.53■□□□□ 0.24
CTSFQ9UBX1 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.53■□□□□ 0.24
CTSFQ9UBX1 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CTSFQ9UBX1 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CTSFQ9UBX1 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.53■□□□□ 0.24
CTSFQ9UBX1 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CTSFQ9UBX1 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTSFQ9UBX1 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTSFQ9UBX1 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CTSFQ9UBX1 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CTSFQ9UBX1 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CTSFQ9UBX1 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CTSFQ9UBX1 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CTSFQ9UBX1 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CTSFQ9UBX1 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CTSFQ9UBX1 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CTSFQ9UBX1 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CTSFQ9UBX1 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CTSFQ9UBX1 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CTSFQ9UBX1 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CTSFQ9UBX1 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CTSFQ9UBX1 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CTSFQ9UBX1 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.52■□□□□ 0.24
CTSFQ9UBX1 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.52■□□□□ 0.24
CTSFQ9UBX1 AL020989.1-201ENST00000422979 469 ntBASIC16.52■□□□□ 0.24
CTSFQ9UBX1 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CTSFQ9UBX1 LAGE3P1-201ENST00000425356 484 ntBASIC16.52■□□□□ 0.24
CTSFQ9UBX1 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CTSFQ9UBX1 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CTSFQ9UBX1 AC092910.1-201ENST00000482027 1129 ntBASIC16.52■□□□□ 0.24
CTSFQ9UBX1 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.52■□□□□ 0.24
CTSFQ9UBX1 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.52■□□□□ 0.24
CTSFQ9UBX1 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms