Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.39■□□□□ 0.37
NCDNQ9UBB6 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NCDNQ9UBB6 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NCDNQ9UBB6 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.39■□□□□ 0.37
NCDNQ9UBB6 RN7SL204P-201ENST00000582831 262 ntBASIC17.39■□□□□ 0.37
NCDNQ9UBB6 GGTLC5P-201ENST00000617623 998 ntBASIC17.39■□□□□ 0.37
NCDNQ9UBB6 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
NCDNQ9UBB6 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCDNQ9UBB6 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NCDNQ9UBB6 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCDNQ9UBB6 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
NCDNQ9UBB6 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.39■□□□□ 0.37
NCDNQ9UBB6 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCDNQ9UBB6 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.39■□□□□ 0.37
NCDNQ9UBB6 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
NCDNQ9UBB6 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NCDNQ9UBB6 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCDNQ9UBB6 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCDNQ9UBB6 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
NCDNQ9UBB6 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
NCDNQ9UBB6 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NCDNQ9UBB6 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
NCDNQ9UBB6 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCDNQ9UBB6 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.38■□□□□ 0.37
NCDNQ9UBB6 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NCDNQ9UBB6 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCDNQ9UBB6 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.38■□□□□ 0.37
NCDNQ9UBB6 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
NCDNQ9UBB6 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.38■□□□□ 0.37
NCDNQ9UBB6 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
NCDNQ9UBB6 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCDNQ9UBB6 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
NCDNQ9UBB6 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCDNQ9UBB6 OR8S1-201ENST00000310194 1080 ntBASIC17.38■□□□□ 0.37
NCDNQ9UBB6 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
NCDNQ9UBB6 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.38■□□□□ 0.37
NCDNQ9UBB6 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.38■□□□□ 0.37
NCDNQ9UBB6 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NCDNQ9UBB6 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCDNQ9UBB6 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.38■□□□□ 0.37
NCDNQ9UBB6 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.38■□□□□ 0.37
NCDNQ9UBB6 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.38■□□□□ 0.37
NCDNQ9UBB6 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.38■□□□□ 0.37
NCDNQ9UBB6 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.38■□□□□ 0.37
NCDNQ9UBB6 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17.38■□□□□ 0.37
NCDNQ9UBB6 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.38■□□□□ 0.37
NCDNQ9UBB6 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCDNQ9UBB6 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.38■□□□□ 0.37
NCDNQ9UBB6 AL121761.2-201ENST00000598007 1648 ntBASIC17.38■□□□□ 0.37
NCDNQ9UBB6 LINC01126-201ENST00000623515 1646 ntBASIC17.38■□□□□ 0.37
NCDNQ9UBB6 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
NCDNQ9UBB6 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCDNQ9UBB6 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCDNQ9UBB6 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCDNQ9UBB6 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
NCDNQ9UBB6 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCDNQ9UBB6 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NCDNQ9UBB6 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NCDNQ9UBB6 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.37■□□□□ 0.37
NCDNQ9UBB6 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NCDNQ9UBB6 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
NCDNQ9UBB6 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
NCDNQ9UBB6 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NCDNQ9UBB6 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NCDNQ9UBB6 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NCDNQ9UBB6 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NCDNQ9UBB6 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.37■□□□□ 0.37
NCDNQ9UBB6 AC055876.3-201ENST00000431496 288 ntBASIC17.37■□□□□ 0.37
NCDNQ9UBB6 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.37■□□□□ 0.37
NCDNQ9UBB6 TIMM8BP1-201ENST00000452384 211 ntBASIC17.37■□□□□ 0.37
NCDNQ9UBB6 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.37■□□□□ 0.37
NCDNQ9UBB6 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.37■□□□□ 0.37
NCDNQ9UBB6 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.37■□□□□ 0.37
NCDNQ9UBB6 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.37■□□□□ 0.37
NCDNQ9UBB6 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.37■□□□□ 0.37
NCDNQ9UBB6 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NCDNQ9UBB6 AC138649.4-201ENST00000612222 287 ntBASIC17.37■□□□□ 0.37
NCDNQ9UBB6 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NCDNQ9UBB6 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NCDNQ9UBB6 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NCDNQ9UBB6 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
NCDNQ9UBB6 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
NCDNQ9UBB6 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NCDNQ9UBB6 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NCDNQ9UBB6 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
NCDNQ9UBB6 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NCDNQ9UBB6 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NCDNQ9UBB6 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NCDNQ9UBB6 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NCDNQ9UBB6 AC010460.3-201ENST00000511359 1579 ntBASIC17.36■□□□□ 0.37
NCDNQ9UBB6 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NCDNQ9UBB6 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NCDNQ9UBB6 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NCDNQ9UBB6 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NCDNQ9UBB6 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NCDNQ9UBB6 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
NCDNQ9UBB6 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NCDNQ9UBB6 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
NCDNQ9UBB6 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NCDNQ9UBB6 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms