Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ECHDC1Q9NTX5 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
ECHDC1Q9NTX5 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
ECHDC1Q9NTX5 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC21.39■■□□□ 1.02
ECHDC1Q9NTX5 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
ECHDC1Q9NTX5 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
ECHDC1Q9NTX5 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
ECHDC1Q9NTX5 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
ECHDC1Q9NTX5 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
ECHDC1Q9NTX5 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ECHDC1Q9NTX5 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC21.39■■□□□ 1.01
ECHDC1Q9NTX5 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
ECHDC1Q9NTX5 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ECHDC1Q9NTX5 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ECHDC1Q9NTX5 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
ECHDC1Q9NTX5 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
ECHDC1Q9NTX5 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
ECHDC1Q9NTX5 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
ECHDC1Q9NTX5 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC21.39■■□□□ 1.01
ECHDC1Q9NTX5 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC21.39■■□□□ 1.01
ECHDC1Q9NTX5 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
ECHDC1Q9NTX5 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ECHDC1Q9NTX5 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC21.39■■□□□ 1.01
ECHDC1Q9NTX5 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
ECHDC1Q9NTX5 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC21.39■■□□□ 1.01
ECHDC1Q9NTX5 IFNL4P1-201ENST00000607083 540 ntBASIC21.39■■□□□ 1.01
ECHDC1Q9NTX5 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
ECHDC1Q9NTX5 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC21.39■■□□□ 1.01
ECHDC1Q9NTX5 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ECHDC1Q9NTX5 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ECHDC1Q9NTX5 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC21.39■■□□□ 1.01
ECHDC1Q9NTX5 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
ECHDC1Q9NTX5 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ECHDC1Q9NTX5 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ECHDC1Q9NTX5 AC026471.1-201ENST00000564629 3026 ntBASIC21.39■■□□□ 1.01
ECHDC1Q9NTX5 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC21.39■■□□□ 1.01
ECHDC1Q9NTX5 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC21.38■■□□□ 1.01
ECHDC1Q9NTX5 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
ECHDC1Q9NTX5 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ECHDC1Q9NTX5 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC21.38■■□□□ 1.01
ECHDC1Q9NTX5 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ECHDC1Q9NTX5 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
ECHDC1Q9NTX5 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC21.38■■□□□ 1.01
ECHDC1Q9NTX5 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ECHDC1Q9NTX5 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ECHDC1Q9NTX5 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC21.38■■□□□ 1.01
ECHDC1Q9NTX5 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC21.38■■□□□ 1.01
ECHDC1Q9NTX5 AKR1C7P-201ENST00000305623 895 ntBASIC21.38■■□□□ 1.01
ECHDC1Q9NTX5 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC21.38■■□□□ 1.01
ECHDC1Q9NTX5 STK19B-204ENST00000512515 211 ntBASIC21.38■■□□□ 1.01
ECHDC1Q9NTX5 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC21.38■■□□□ 1.01
ECHDC1Q9NTX5 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC21.38■■□□□ 1.01
ECHDC1Q9NTX5 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
ECHDC1Q9NTX5 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
ECHDC1Q9NTX5 REXO1L6P-202ENST00000619970 1078 ntBASIC21.38■■□□□ 1.01
ECHDC1Q9NTX5 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC21.38■■□□□ 1.01
ECHDC1Q9NTX5 AC009336.1-201ENST00000608941 1553 ntBASIC21.38■■□□□ 1.01
ECHDC1Q9NTX5 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC21.38■■□□□ 1.01
ECHDC1Q9NTX5 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
ECHDC1Q9NTX5 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ECHDC1Q9NTX5 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
ECHDC1Q9NTX5 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
ECHDC1Q9NTX5 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ECHDC1Q9NTX5 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
ECHDC1Q9NTX5 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC21.37■■□□□ 1.01
ECHDC1Q9NTX5 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ECHDC1Q9NTX5 AC046185.3-201ENST00000623228 1824 ntBASIC21.37■■□□□ 1.01
ECHDC1Q9NTX5 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
ECHDC1Q9NTX5 AC141586.5-201ENST00000624546 2050 ntBASIC21.37■■□□□ 1.01
ECHDC1Q9NTX5 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ECHDC1Q9NTX5 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ECHDC1Q9NTX5 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
ECHDC1Q9NTX5 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ECHDC1Q9NTX5 TLE1-202ENST00000376484 666 ntTSL 3 BASIC21.37■■□□□ 1.01
ECHDC1Q9NTX5 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC21.37■■□□□ 1.01
ECHDC1Q9NTX5 KLF4P1-201ENST00000412782 1185 ntBASIC21.37■■□□□ 1.01
ECHDC1Q9NTX5 SPDYE21P-201ENST00000413323 827 ntBASIC21.37■■□□□ 1.01
ECHDC1Q9NTX5 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
ECHDC1Q9NTX5 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC21.37■■□□□ 1.01
ECHDC1Q9NTX5 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ECHDC1Q9NTX5 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC21.37■■□□□ 1.01
ECHDC1Q9NTX5 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ECHDC1Q9NTX5 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC21.37■■□□□ 1.01
ECHDC1Q9NTX5 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ECHDC1Q9NTX5 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
ECHDC1Q9NTX5 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC21.37■■□□□ 1.01
ECHDC1Q9NTX5 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ECHDC1Q9NTX5 CROCCP2-202ENST00000412962 2773 ntBASIC21.36■■□□□ 1.01
ECHDC1Q9NTX5 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC21.36■■□□□ 1.01
ECHDC1Q9NTX5 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ECHDC1Q9NTX5 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
ECHDC1Q9NTX5 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC21.36■■□□□ 1.01
ECHDC1Q9NTX5 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ECHDC1Q9NTX5 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ECHDC1Q9NTX5 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC21.36■■□□□ 1.01
ECHDC1Q9NTX5 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC21.36■■□□□ 1.01
ECHDC1Q9NTX5 RBM17P3-201ENST00000417687 1192 ntBASIC21.36■■□□□ 1.01
ECHDC1Q9NTX5 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC21.36■■□□□ 1.01
ECHDC1Q9NTX5 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC21.36■■□□□ 1.01
ECHDC1Q9NTX5 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms