Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
SALL1Q9NSC2 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SALL1Q9NSC2 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
SALL1Q9NSC2 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC21.13■□□□□ 0.97
SALL1Q9NSC2 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SALL1Q9NSC2 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SALL1Q9NSC2 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SALL1Q9NSC2 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SALL1Q9NSC2 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SALL1Q9NSC2 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SALL1Q9NSC2 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC21.12■□□□□ 0.97
SALL1Q9NSC2 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SALL1Q9NSC2 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SALL1Q9NSC2 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC21.12■□□□□ 0.97
SALL1Q9NSC2 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC21.12■□□□□ 0.97
SALL1Q9NSC2 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC21.12■□□□□ 0.97
SALL1Q9NSC2 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SALL1Q9NSC2 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC21.12■□□□□ 0.97
SALL1Q9NSC2 AC008667.4-201ENST00000607370 168 ntBASIC21.12■□□□□ 0.97
SALL1Q9NSC2 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SALL1Q9NSC2 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
SALL1Q9NSC2 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
SALL1Q9NSC2 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
SALL1Q9NSC2 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC21.12■□□□□ 0.97
SALL1Q9NSC2 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SALL1Q9NSC2 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
SALL1Q9NSC2 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
SALL1Q9NSC2 GNE-204ENST00000539208 2190 ntTSL 2 BASIC21.12■□□□□ 0.97
SALL1Q9NSC2 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SALL1Q9NSC2 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SALL1Q9NSC2 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SALL1Q9NSC2 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
SALL1Q9NSC2 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SALL1Q9NSC2 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC21.11■□□□□ 0.97
SALL1Q9NSC2 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC21.11■□□□□ 0.97
SALL1Q9NSC2 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
SALL1Q9NSC2 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SALL1Q9NSC2 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
SALL1Q9NSC2 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
SALL1Q9NSC2 SLC4A1APP2-201ENST00000424054 1259 ntBASIC21.11■□□□□ 0.97
SALL1Q9NSC2 IGHV3-65-201ENST00000523210 341 ntBASIC21.11■□□□□ 0.97
SALL1Q9NSC2 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC21.11■□□□□ 0.97
SALL1Q9NSC2 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC21.11■□□□□ 0.97
SALL1Q9NSC2 AC092865.5-201ENST00000545435 363 ntBASIC21.11■□□□□ 0.97
SALL1Q9NSC2 CIPC-205ENST00000555437 566 ntTSL 3 BASIC21.11■□□□□ 0.97
SALL1Q9NSC2 AC040169.1-201ENST00000565382 521 ntBASIC21.11■□□□□ 0.97
SALL1Q9NSC2 AL353135.1-201ENST00000606729 504 ntBASIC21.11■□□□□ 0.97
SALL1Q9NSC2 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC21.11■□□□□ 0.97
SALL1Q9NSC2 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC21.11■□□□□ 0.97
SALL1Q9NSC2 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC21.11■□□□□ 0.97
SALL1Q9NSC2 AL805961.1-202ENST00000641562 540 ntBASIC21.11■□□□□ 0.97
SALL1Q9NSC2 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SALL1Q9NSC2 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21.11■□□□□ 0.97
SALL1Q9NSC2 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SALL1Q9NSC2 AC006116.8-202ENST00000587620 1550 ntBASIC21.11■□□□□ 0.97
SALL1Q9NSC2 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SALL1Q9NSC2 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
SALL1Q9NSC2 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SALL1Q9NSC2 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SALL1Q9NSC2 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC21.11■□□□□ 0.97
SALL1Q9NSC2 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SALL1Q9NSC2 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
SALL1Q9NSC2 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC21.11■□□□□ 0.97
SALL1Q9NSC2 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SALL1Q9NSC2 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SALL1Q9NSC2 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC21.1■□□□□ 0.97
SALL1Q9NSC2 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
SALL1Q9NSC2 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SALL1Q9NSC2 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
SALL1Q9NSC2 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SALL1Q9NSC2 GPR89P-201ENST00000407924 1495 ntBASIC21.1■□□□□ 0.97
SALL1Q9NSC2 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC21.1■□□□□ 0.97
SALL1Q9NSC2 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC21.1■□□□□ 0.97
SALL1Q9NSC2 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC21.1■□□□□ 0.97
SALL1Q9NSC2 RNA5SP416-201ENST00000516838 111 ntBASIC21.1■□□□□ 0.97
SALL1Q9NSC2 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC21.1■□□□□ 0.97
SALL1Q9NSC2 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SALL1Q9NSC2 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC21.1■□□□□ 0.97
SALL1Q9NSC2 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC21.1■□□□□ 0.97
SALL1Q9NSC2 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC21.1■□□□□ 0.97
SALL1Q9NSC2 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SALL1Q9NSC2 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
SALL1Q9NSC2 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
SALL1Q9NSC2 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
SALL1Q9NSC2 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC21.1■□□□□ 0.97
SALL1Q9NSC2 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SALL1Q9NSC2 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
SALL1Q9NSC2 REXO1L11P-201ENST00000620964 1927 ntBASIC21.1■□□□□ 0.97
SALL1Q9NSC2 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
SALL1Q9NSC2 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SALL1Q9NSC2 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SALL1Q9NSC2 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SALL1Q9NSC2 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SALL1Q9NSC2 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SALL1Q9NSC2 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SALL1Q9NSC2 AC007967.2-201ENST00000432613 625 ntBASIC21.09■□□□□ 0.97
SALL1Q9NSC2 RPS15P9-201ENST00000494093 319 ntBASIC21.09■□□□□ 0.97
SALL1Q9NSC2 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
SALL1Q9NSC2 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC21.09■□□□□ 0.97
SALL1Q9NSC2 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms