Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PRDM9Q9NQV7 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.62■□□□□ 0.25
PRDM9Q9NQV7 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PRDM9Q9NQV7 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PRDM9Q9NQV7 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRDM9Q9NQV7 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PRDM9Q9NQV7 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRDM9Q9NQV7 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRDM9Q9NQV7 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRDM9Q9NQV7 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRDM9Q9NQV7 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.62■□□□□ 0.25
PRDM9Q9NQV7 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.62■□□□□ 0.25
PRDM9Q9NQV7 UNC93B7-201ENST00000509439 705 ntBASIC16.62■□□□□ 0.25
PRDM9Q9NQV7 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.62■□□□□ 0.25
PRDM9Q9NQV7 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.62■□□□□ 0.25
PRDM9Q9NQV7 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.62■□□□□ 0.25
PRDM9Q9NQV7 AC008686.1-203ENST00000591826 463 ntTSL 2 BASIC16.62■□□□□ 0.25
PRDM9Q9NQV7 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PRDM9Q9NQV7 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.62■□□□□ 0.25
PRDM9Q9NQV7 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.62■□□□□ 0.25
PRDM9Q9NQV7 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
PRDM9Q9NQV7 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.62■□□□□ 0.25
PRDM9Q9NQV7 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRDM9Q9NQV7 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRDM9Q9NQV7 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRDM9Q9NQV7 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.62■□□□□ 0.25
PRDM9Q9NQV7 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.62■□□□□ 0.25
PRDM9Q9NQV7 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRDM9Q9NQV7 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.61■□□□□ 0.25
PRDM9Q9NQV7 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRDM9Q9NQV7 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.61■□□□□ 0.25
PRDM9Q9NQV7 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRDM9Q9NQV7 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRDM9Q9NQV7 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.61■□□□□ 0.25
PRDM9Q9NQV7 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRDM9Q9NQV7 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRDM9Q9NQV7 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRDM9Q9NQV7 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
PRDM9Q9NQV7 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRDM9Q9NQV7 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
PRDM9Q9NQV7 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRDM9Q9NQV7 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.61■□□□□ 0.25
PRDM9Q9NQV7 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.61■□□□□ 0.25
PRDM9Q9NQV7 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRDM9Q9NQV7 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRDM9Q9NQV7 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.61■□□□□ 0.25
PRDM9Q9NQV7 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.61■□□□□ 0.25
PRDM9Q9NQV7 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.61■□□□□ 0.25
PRDM9Q9NQV7 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRDM9Q9NQV7 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.61■□□□□ 0.25
PRDM9Q9NQV7 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRDM9Q9NQV7 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PRDM9Q9NQV7 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PRDM9Q9NQV7 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRDM9Q9NQV7 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRDM9Q9NQV7 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRDM9Q9NQV7 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRDM9Q9NQV7 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRDM9Q9NQV7 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRDM9Q9NQV7 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRDM9Q9NQV7 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.61■□□□□ 0.25
PRDM9Q9NQV7 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRDM9Q9NQV7 AC016396.2-201ENST00000562575 1417 ntBASIC16.61■□□□□ 0.25
PRDM9Q9NQV7 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRDM9Q9NQV7 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRDM9Q9NQV7 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRDM9Q9NQV7 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
PRDM9Q9NQV7 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.61■□□□□ 0.25
PRDM9Q9NQV7 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
PRDM9Q9NQV7 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.6■□□□□ 0.25
PRDM9Q9NQV7 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRDM9Q9NQV7 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRDM9Q9NQV7 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.6■□□□□ 0.25
PRDM9Q9NQV7 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.6■□□□□ 0.25
PRDM9Q9NQV7 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRDM9Q9NQV7 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.6■□□□□ 0.25
PRDM9Q9NQV7 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRDM9Q9NQV7 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRDM9Q9NQV7 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRDM9Q9NQV7 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PRDM9Q9NQV7 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRDM9Q9NQV7 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.6■□□□□ 0.25
PRDM9Q9NQV7 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRDM9Q9NQV7 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PRDM9Q9NQV7 TPM4P1-201ENST00000436100 807 ntBASIC16.6■□□□□ 0.25
PRDM9Q9NQV7 AC132008.2-207ENST00000454517 770 ntBASIC16.6■□□□□ 0.25
PRDM9Q9NQV7 AC090142.2-201ENST00000483263 416 ntBASIC16.6■□□□□ 0.25
PRDM9Q9NQV7 IGHV3-52-201ENST00000519770 353 ntBASIC16.6■□□□□ 0.25
PRDM9Q9NQV7 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.6■□□□□ 0.25
PRDM9Q9NQV7 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.6■□□□□ 0.25
PRDM9Q9NQV7 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.6■□□□□ 0.25
PRDM9Q9NQV7 RN7SL510P-201ENST00000581311 263 ntBASIC16.6■□□□□ 0.25
PRDM9Q9NQV7 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.6■□□□□ 0.25
PRDM9Q9NQV7 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PRDM9Q9NQV7 AC019129.2-201ENST00000609837 1235 ntBASIC16.6■□□□□ 0.25
PRDM9Q9NQV7 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PRDM9Q9NQV7 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.6■□□□□ 0.25
PRDM9Q9NQV7 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
PRDM9Q9NQV7 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRDM9Q9NQV7 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms