Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.63■□□□□ 0.25
NEUROD4Q9HD90 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
NEUROD4Q9HD90 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.63■□□□□ 0.25
NEUROD4Q9HD90 RNF126P1-202ENST00000569893 925 ntBASIC16.63■□□□□ 0.25
NEUROD4Q9HD90 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.63■□□□□ 0.25
NEUROD4Q9HD90 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NEUROD4Q9HD90 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NEUROD4Q9HD90 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.63■□□□□ 0.25
NEUROD4Q9HD90 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NEUROD4Q9HD90 AC097374.2-201ENST00000618617 1306 ntBASIC16.63■□□□□ 0.25
NEUROD4Q9HD90 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NEUROD4Q9HD90 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
NEUROD4Q9HD90 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NEUROD4Q9HD90 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
NEUROD4Q9HD90 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
NEUROD4Q9HD90 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.62■□□□□ 0.25
NEUROD4Q9HD90 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NEUROD4Q9HD90 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NEUROD4Q9HD90 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.62■□□□□ 0.25
NEUROD4Q9HD90 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.62■□□□□ 0.25
NEUROD4Q9HD90 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.62■□□□□ 0.25
NEUROD4Q9HD90 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NEUROD4Q9HD90 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
NEUROD4Q9HD90 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NEUROD4Q9HD90 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
NEUROD4Q9HD90 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NEUROD4Q9HD90 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
NEUROD4Q9HD90 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.62■□□□□ 0.25
NEUROD4Q9HD90 SPDYE13P-201ENST00000445314 798 ntBASIC16.62■□□□□ 0.25
NEUROD4Q9HD90 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.62■□□□□ 0.25
NEUROD4Q9HD90 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.62■□□□□ 0.25
NEUROD4Q9HD90 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NEUROD4Q9HD90 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NEUROD4Q9HD90 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NEUROD4Q9HD90 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.62■□□□□ 0.25
NEUROD4Q9HD90 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.62■□□□□ 0.25
NEUROD4Q9HD90 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
NEUROD4Q9HD90 PRORSD1P-202ENST00000563365 2154 ntBASIC16.62■□□□□ 0.25
NEUROD4Q9HD90 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
NEUROD4Q9HD90 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NEUROD4Q9HD90 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NEUROD4Q9HD90 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.62■□□□□ 0.25
NEUROD4Q9HD90 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NEUROD4Q9HD90 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.62■□□□□ 0.25
NEUROD4Q9HD90 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
NEUROD4Q9HD90 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.62■□□□□ 0.25
NEUROD4Q9HD90 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NEUROD4Q9HD90 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.62■□□□□ 0.25
NEUROD4Q9HD90 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NEUROD4Q9HD90 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NEUROD4Q9HD90 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.61■□□□□ 0.25
NEUROD4Q9HD90 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NEUROD4Q9HD90 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
NEUROD4Q9HD90 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.61■□□□□ 0.25
NEUROD4Q9HD90 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NEUROD4Q9HD90 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
NEUROD4Q9HD90 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.61■□□□□ 0.25
NEUROD4Q9HD90 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NEUROD4Q9HD90 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.61■□□□□ 0.25
NEUROD4Q9HD90 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
NEUROD4Q9HD90 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.61■□□□□ 0.25
NEUROD4Q9HD90 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.61■□□□□ 0.25
NEUROD4Q9HD90 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NEUROD4Q9HD90 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
NEUROD4Q9HD90 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.61■□□□□ 0.25
NEUROD4Q9HD90 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
NEUROD4Q9HD90 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.61■□□□□ 0.25
NEUROD4Q9HD90 AC002558.1-201ENST00000488906 803 ntBASIC16.61■□□□□ 0.25
NEUROD4Q9HD90 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.61■□□□□ 0.25
NEUROD4Q9HD90 GUSBP12-201ENST00000513727 720 ntBASIC16.61■□□□□ 0.25
NEUROD4Q9HD90 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NEUROD4Q9HD90 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.61■□□□□ 0.25
NEUROD4Q9HD90 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NEUROD4Q9HD90 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.61■□□□□ 0.25
NEUROD4Q9HD90 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.61■□□□□ 0.25
NEUROD4Q9HD90 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NEUROD4Q9HD90 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
NEUROD4Q9HD90 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NEUROD4Q9HD90 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NEUROD4Q9HD90 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NEUROD4Q9HD90 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
NEUROD4Q9HD90 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NEUROD4Q9HD90 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
NEUROD4Q9HD90 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
NEUROD4Q9HD90 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NEUROD4Q9HD90 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NEUROD4Q9HD90 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
NEUROD4Q9HD90 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NEUROD4Q9HD90 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
NEUROD4Q9HD90 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NEUROD4Q9HD90 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.6■□□□□ 0.25
NEUROD4Q9HD90 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NEUROD4Q9HD90 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NEUROD4Q9HD90 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NEUROD4Q9HD90 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
NEUROD4Q9HD90 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
NEUROD4Q9HD90 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NEUROD4Q9HD90 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
NEUROD4Q9HD90 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
NEUROD4Q9HD90 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms