Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
VAT1LQ9HCJ6 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
VAT1LQ9HCJ6 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
VAT1LQ9HCJ6 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
VAT1LQ9HCJ6 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
VAT1LQ9HCJ6 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.37■□□□□ 0.85
VAT1LQ9HCJ6 AC132938.5-201ENST00000624980 1813 ntBASIC20.37■□□□□ 0.85
VAT1LQ9HCJ6 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.37■□□□□ 0.85
VAT1LQ9HCJ6 HLA-A-201ENST00000376802 1334 ntBASIC20.37■□□□□ 0.85
VAT1LQ9HCJ6 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
VAT1LQ9HCJ6 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
VAT1LQ9HCJ6 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.37■□□□□ 0.85
VAT1LQ9HCJ6 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
VAT1LQ9HCJ6 KRT18P67-201ENST00000432816 1264 ntBASIC20.37■□□□□ 0.85
VAT1LQ9HCJ6 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC20.37■□□□□ 0.85
VAT1LQ9HCJ6 AC073648.2-201ENST00000510116 352 ntBASIC20.37■□□□□ 0.85
VAT1LQ9HCJ6 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC20.37■□□□□ 0.85
VAT1LQ9HCJ6 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.37■□□□□ 0.85
VAT1LQ9HCJ6 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
VAT1LQ9HCJ6 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
VAT1LQ9HCJ6 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
VAT1LQ9HCJ6 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
VAT1LQ9HCJ6 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
VAT1LQ9HCJ6 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
VAT1LQ9HCJ6 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
VAT1LQ9HCJ6 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20.37■□□□□ 0.85
VAT1LQ9HCJ6 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
VAT1LQ9HCJ6 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20.37■□□□□ 0.85
VAT1LQ9HCJ6 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
VAT1LQ9HCJ6 AL353593.2-201ENST00000602529 1483 ntBASIC20.37■□□□□ 0.85
VAT1LQ9HCJ6 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
VAT1LQ9HCJ6 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
VAT1LQ9HCJ6 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
VAT1LQ9HCJ6 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC20.36■□□□□ 0.85
VAT1LQ9HCJ6 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
VAT1LQ9HCJ6 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
VAT1LQ9HCJ6 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
VAT1LQ9HCJ6 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.36■□□□□ 0.85
VAT1LQ9HCJ6 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VAT1LQ9HCJ6 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
VAT1LQ9HCJ6 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VAT1LQ9HCJ6 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.36■□□□□ 0.85
VAT1LQ9HCJ6 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC20.36■□□□□ 0.85
VAT1LQ9HCJ6 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC20.36■□□□□ 0.85
VAT1LQ9HCJ6 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.36■□□□□ 0.85
VAT1LQ9HCJ6 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
VAT1LQ9HCJ6 AL662844.1-201ENST00000546340 181 ntBASIC20.36■□□□□ 0.85
VAT1LQ9HCJ6 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.36■□□□□ 0.85
VAT1LQ9HCJ6 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.36■□□□□ 0.85
VAT1LQ9HCJ6 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.36■□□□□ 0.85
VAT1LQ9HCJ6 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC20.36■□□□□ 0.85
VAT1LQ9HCJ6 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
VAT1LQ9HCJ6 AC006116.8-202ENST00000587620 1550 ntBASIC20.36■□□□□ 0.85
VAT1LQ9HCJ6 AL133373.2-201ENST00000623187 2828 ntBASIC20.36■□□□□ 0.85
VAT1LQ9HCJ6 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VAT1LQ9HCJ6 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VAT1LQ9HCJ6 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
VAT1LQ9HCJ6 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
VAT1LQ9HCJ6 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VAT1LQ9HCJ6 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC20.36■□□□□ 0.85
VAT1LQ9HCJ6 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VAT1LQ9HCJ6 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
VAT1LQ9HCJ6 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
VAT1LQ9HCJ6 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
VAT1LQ9HCJ6 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
VAT1LQ9HCJ6 AC079776.2-201ENST00000641154 1609 ntBASIC20.35■□□□□ 0.85
VAT1LQ9HCJ6 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
VAT1LQ9HCJ6 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.35■□□□□ 0.85
VAT1LQ9HCJ6 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
VAT1LQ9HCJ6 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
VAT1LQ9HCJ6 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
VAT1LQ9HCJ6 AC008764.6-201ENST00000595909 2069 ntBASIC20.35■□□□□ 0.85
VAT1LQ9HCJ6 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
VAT1LQ9HCJ6 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
VAT1LQ9HCJ6 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.35■□□□□ 0.85
VAT1LQ9HCJ6 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
VAT1LQ9HCJ6 AL031284.1-201ENST00000419297 478 ntBASIC20.35■□□□□ 0.85
VAT1LQ9HCJ6 RPS2P1-201ENST00000434010 821 ntBASIC20.35■□□□□ 0.85
VAT1LQ9HCJ6 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
VAT1LQ9HCJ6 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.35■□□□□ 0.85
VAT1LQ9HCJ6 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.35■□□□□ 0.85
VAT1LQ9HCJ6 AC064862.7-201ENST00000604520 867 ntBASIC20.35■□□□□ 0.85
VAT1LQ9HCJ6 AL773604.1-201ENST00000617417 272 ntBASIC20.35■□□□□ 0.85
VAT1LQ9HCJ6 FUT8-AS1-201ENST00000621019 1521 ntBASIC20.35■□□□□ 0.85
VAT1LQ9HCJ6 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
VAT1LQ9HCJ6 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.35■□□□□ 0.85
VAT1LQ9HCJ6 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
VAT1LQ9HCJ6 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
VAT1LQ9HCJ6 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.35■□□□□ 0.85
VAT1LQ9HCJ6 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
VAT1LQ9HCJ6 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC20.35■□□□□ 0.85
VAT1LQ9HCJ6 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.35■□□□□ 0.85
VAT1LQ9HCJ6 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
VAT1LQ9HCJ6 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
VAT1LQ9HCJ6 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
VAT1LQ9HCJ6 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.35■□□□□ 0.85
VAT1LQ9HCJ6 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
VAT1LQ9HCJ6 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
VAT1LQ9HCJ6 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
VAT1LQ9HCJ6 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms