Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZFYVE28Q9HCC9 AP001059.3-201ENST00000619053 235 ntBASIC19.95■□□□□ 0.78
ZFYVE28Q9HCC9 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.95■□□□□ 0.78
ZFYVE28Q9HCC9 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZFYVE28Q9HCC9 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ZFYVE28Q9HCC9 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.95■□□□□ 0.78
ZFYVE28Q9HCC9 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.95■□□□□ 0.78
ZFYVE28Q9HCC9 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZFYVE28Q9HCC9 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZFYVE28Q9HCC9 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.94■□□□□ 0.78
ZFYVE28Q9HCC9 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
ZFYVE28Q9HCC9 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.94■□□□□ 0.78
ZFYVE28Q9HCC9 AC126763.1-201ENST00000552015 2118 ntBASIC19.94■□□□□ 0.78
ZFYVE28Q9HCC9 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ZFYVE28Q9HCC9 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZFYVE28Q9HCC9 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZFYVE28Q9HCC9 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.94■□□□□ 0.78
ZFYVE28Q9HCC9 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.94■□□□□ 0.78
ZFYVE28Q9HCC9 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC19.94■□□□□ 0.78
ZFYVE28Q9HCC9 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ZFYVE28Q9HCC9 AC107890.1-201ENST00000422478 521 ntBASIC19.94■□□□□ 0.78
ZFYVE28Q9HCC9 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC19.94■□□□□ 0.78
ZFYVE28Q9HCC9 FAM207CP-201ENST00000443486 507 ntBASIC19.94■□□□□ 0.78
ZFYVE28Q9HCC9 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.94■□□□□ 0.78
ZFYVE28Q9HCC9 RN7SL589P-201ENST00000481268 310 ntBASIC19.94■□□□□ 0.78
ZFYVE28Q9HCC9 AC079140.1-201ENST00000508039 487 ntBASIC19.94■□□□□ 0.78
ZFYVE28Q9HCC9 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC19.94■□□□□ 0.78
ZFYVE28Q9HCC9 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ZFYVE28Q9HCC9 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.94■□□□□ 0.78
ZFYVE28Q9HCC9 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZFYVE28Q9HCC9 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.94■□□□□ 0.78
ZFYVE28Q9HCC9 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC19.94■□□□□ 0.78
ZFYVE28Q9HCC9 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ZFYVE28Q9HCC9 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZFYVE28Q9HCC9 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZFYVE28Q9HCC9 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.94■□□□□ 0.78
ZFYVE28Q9HCC9 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.94■□□□□ 0.78
ZFYVE28Q9HCC9 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZFYVE28Q9HCC9 AC100803.2-201ENST00000562459 1963 ntBASIC19.94■□□□□ 0.78
ZFYVE28Q9HCC9 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ZFYVE28Q9HCC9 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.93■□□□□ 0.78
ZFYVE28Q9HCC9 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZFYVE28Q9HCC9 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZFYVE28Q9HCC9 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZFYVE28Q9HCC9 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.93■□□□□ 0.78
ZFYVE28Q9HCC9 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZFYVE28Q9HCC9 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.93■□□□□ 0.78
ZFYVE28Q9HCC9 MIR661-201ENST00000384842 89 ntBASIC19.93■□□□□ 0.78
ZFYVE28Q9HCC9 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC19.93■□□□□ 0.78
ZFYVE28Q9HCC9 CCDC74BP1-201ENST00000508880 1123 ntBASIC19.93■□□□□ 0.78
ZFYVE28Q9HCC9 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZFYVE28Q9HCC9 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC19.93■□□□□ 0.78
ZFYVE28Q9HCC9 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC19.93■□□□□ 0.78
ZFYVE28Q9HCC9 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC19.93■□□□□ 0.78
ZFYVE28Q9HCC9 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ZFYVE28Q9HCC9 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZFYVE28Q9HCC9 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZFYVE28Q9HCC9 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
ZFYVE28Q9HCC9 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.93■□□□□ 0.78
ZFYVE28Q9HCC9 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZFYVE28Q9HCC9 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.93■□□□□ 0.78
ZFYVE28Q9HCC9 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.93■□□□□ 0.78
ZFYVE28Q9HCC9 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
ZFYVE28Q9HCC9 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.93■□□□□ 0.78
ZFYVE28Q9HCC9 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.93■□□□□ 0.78
ZFYVE28Q9HCC9 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZFYVE28Q9HCC9 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC19.92■□□□□ 0.78
ZFYVE28Q9HCC9 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ZFYVE28Q9HCC9 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZFYVE28Q9HCC9 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZFYVE28Q9HCC9 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ZFYVE28Q9HCC9 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.92■□□□□ 0.78
ZFYVE28Q9HCC9 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.92■□□□□ 0.78
ZFYVE28Q9HCC9 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.92■□□□□ 0.78
ZFYVE28Q9HCC9 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.92■□□□□ 0.78
ZFYVE28Q9HCC9 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.92■□□□□ 0.78
ZFYVE28Q9HCC9 AC140658.5-201ENST00000438532 169 ntBASIC19.92■□□□□ 0.78
ZFYVE28Q9HCC9 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
ZFYVE28Q9HCC9 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19.92■□□□□ 0.78
ZFYVE28Q9HCC9 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ZFYVE28Q9HCC9 LINC02560-201ENST00000596379 459 ntBASIC19.92■□□□□ 0.78
ZFYVE28Q9HCC9 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC19.92■□□□□ 0.78
ZFYVE28Q9HCC9 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZFYVE28Q9HCC9 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ZFYVE28Q9HCC9 AC129492.6-201ENST00000611383 1305 ntBASIC19.92■□□□□ 0.78
ZFYVE28Q9HCC9 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZFYVE28Q9HCC9 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.92■□□□□ 0.78
ZFYVE28Q9HCC9 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZFYVE28Q9HCC9 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZFYVE28Q9HCC9 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZFYVE28Q9HCC9 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
ZFYVE28Q9HCC9 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZFYVE28Q9HCC9 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ZFYVE28Q9HCC9 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.91■□□□□ 0.78
ZFYVE28Q9HCC9 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZFYVE28Q9HCC9 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.91■□□□□ 0.78
ZFYVE28Q9HCC9 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ZFYVE28Q9HCC9 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZFYVE28Q9HCC9 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZFYVE28Q9HCC9 FAM58DP-201ENST00000428076 619 ntBASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms