Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
YIPF4Q9BSR8 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
YIPF4Q9BSR8 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
YIPF4Q9BSR8 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
YIPF4Q9BSR8 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
YIPF4Q9BSR8 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
YIPF4Q9BSR8 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
YIPF4Q9BSR8 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
YIPF4Q9BSR8 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.57■□□□□ 0.24
YIPF4Q9BSR8 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
YIPF4Q9BSR8 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
YIPF4Q9BSR8 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
YIPF4Q9BSR8 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
YIPF4Q9BSR8 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.57■□□□□ 0.24
YIPF4Q9BSR8 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.57■□□□□ 0.24
YIPF4Q9BSR8 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
YIPF4Q9BSR8 DDX43P3-201ENST00000441064 443 ntBASIC16.57■□□□□ 0.24
YIPF4Q9BSR8 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.57■□□□□ 0.24
YIPF4Q9BSR8 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
YIPF4Q9BSR8 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.57■□□□□ 0.24
YIPF4Q9BSR8 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.57■□□□□ 0.24
YIPF4Q9BSR8 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.57■□□□□ 0.24
YIPF4Q9BSR8 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.57■□□□□ 0.24
YIPF4Q9BSR8 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.57■□□□□ 0.24
YIPF4Q9BSR8 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
YIPF4Q9BSR8 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
YIPF4Q9BSR8 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.57■□□□□ 0.24
YIPF4Q9BSR8 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
YIPF4Q9BSR8 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
YIPF4Q9BSR8 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
YIPF4Q9BSR8 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
YIPF4Q9BSR8 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.57■□□□□ 0.24
YIPF4Q9BSR8 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
YIPF4Q9BSR8 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
YIPF4Q9BSR8 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
YIPF4Q9BSR8 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
YIPF4Q9BSR8 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
YIPF4Q9BSR8 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
YIPF4Q9BSR8 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
YIPF4Q9BSR8 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
YIPF4Q9BSR8 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
YIPF4Q9BSR8 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.56■□□□□ 0.24
YIPF4Q9BSR8 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.56■□□□□ 0.24
YIPF4Q9BSR8 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
YIPF4Q9BSR8 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
YIPF4Q9BSR8 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.56■□□□□ 0.24
YIPF4Q9BSR8 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.56■□□□□ 0.24
YIPF4Q9BSR8 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
YIPF4Q9BSR8 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
YIPF4Q9BSR8 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.56■□□□□ 0.24
YIPF4Q9BSR8 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
YIPF4Q9BSR8 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
YIPF4Q9BSR8 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.56■□□□□ 0.24
YIPF4Q9BSR8 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.56■□□□□ 0.24
YIPF4Q9BSR8 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
YIPF4Q9BSR8 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.56■□□□□ 0.24
YIPF4Q9BSR8 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
YIPF4Q9BSR8 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.56■□□□□ 0.24
YIPF4Q9BSR8 KRT126P-201ENST00000549467 1181 ntBASIC16.56■□□□□ 0.24
YIPF4Q9BSR8 AC124864.1-201ENST00000623408 392 ntBASIC16.56■□□□□ 0.24
YIPF4Q9BSR8 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
YIPF4Q9BSR8 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
YIPF4Q9BSR8 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
YIPF4Q9BSR8 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
YIPF4Q9BSR8 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
YIPF4Q9BSR8 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
YIPF4Q9BSR8 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
YIPF4Q9BSR8 HLA-J-201ENST00000462773 1622 ntBASIC16.56■□□□□ 0.24
YIPF4Q9BSR8 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
YIPF4Q9BSR8 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.55■□□□□ 0.24
YIPF4Q9BSR8 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
YIPF4Q9BSR8 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
YIPF4Q9BSR8 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
YIPF4Q9BSR8 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.55■□□□□ 0.24
YIPF4Q9BSR8 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
YIPF4Q9BSR8 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
YIPF4Q9BSR8 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
YIPF4Q9BSR8 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
YIPF4Q9BSR8 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
YIPF4Q9BSR8 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.55■□□□□ 0.24
YIPF4Q9BSR8 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
YIPF4Q9BSR8 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
YIPF4Q9BSR8 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.55■□□□□ 0.24
YIPF4Q9BSR8 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
YIPF4Q9BSR8 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
YIPF4Q9BSR8 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
YIPF4Q9BSR8 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
YIPF4Q9BSR8 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.55■□□□□ 0.24
YIPF4Q9BSR8 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
YIPF4Q9BSR8 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.55■□□□□ 0.24
YIPF4Q9BSR8 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.55■□□□□ 0.24
YIPF4Q9BSR8 HCG4P8-203ENST00000443049 980 ntBASIC16.55■□□□□ 0.24
YIPF4Q9BSR8 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.55■□□□□ 0.24
YIPF4Q9BSR8 AC011498.5-201ENST00000592027 486 ntBASIC16.55■□□□□ 0.24
YIPF4Q9BSR8 AC069148.1-201ENST00000608741 768 ntBASIC16.55■□□□□ 0.24
YIPF4Q9BSR8 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.55■□□□□ 0.24
YIPF4Q9BSR8 CROCCP2-202ENST00000412962 2773 ntBASIC16.55■□□□□ 0.24
YIPF4Q9BSR8 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
YIPF4Q9BSR8 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
YIPF4Q9BSR8 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms